Pairwise Alignments

Query, 450 a.a., protein TolB from Vibrio cholerae E7946 ATCC 55056

Subject, 692 a.a., Acylamino-acid-releasing enzyme (EC 3.4.19.1) from Sphingobium sp. HT1-2

 Score = 59.3 bits (142), Expect = 4e-13
 Identities = 63/248 (25%), Positives = 103/248 (41%), Gaps = 60/248 (24%)

Query: 220 QPLMSPAWSPDGQTLAYVSFQNG------QAEIYMMNIYSGKREKLTSFPRHNGAPRFSP 273
           Q    P  SPDG+++AYV  Q        +  I++++  +G +  L +       PR+SP
Sbjct: 44  QVATDPQISPDGKSVAYVRRQGDIMTDRQKGAIWLVDTATGAQRPLVA---DASQPRWSP 100

Query: 274 DGKTLALVLSKTGNLQVYTMDLATRRLTEVTSGRSNNTEPFWHPDGKSLI---------- 323
           DGK +A + +  G  Q++   L T     VT+         W PDGKSL           
Sbjct: 101 DGKRIAYIAADAGKPQLFVRWLDTGATVRVTTLPDGPQSVTWSPDGKSLAYIMRVPADPM 160

Query: 324 -------------------------FTSDRGGKPQ-----IYQVNLSGGETKRLTWQGSQ 353
                                    + +D GG  Q     I+ V+  GG  ++L++ G  
Sbjct: 161 KLGRAPDKPEGAEWAKPLEVIDRVDYRNDGGGYVQAGYDHIFLVSADGGPARQLSF-GDY 219

Query: 354 NLGGQI--TPDGKFLVM--VNRSD-----SGFNLAKQDLETGAMQILT-KTLLDESPSIA 403
             GG +  TPDG+ ++   V + D         +   D+ +GA+  LT +   D +P ++
Sbjct: 220 QDGGPLSWTPDGRAILFSAVRKPDWQQKVFDPEIYTLDIASGAISPLTSREGPDVAPVVS 279

Query: 404 PNGGMVIY 411
           P+G  V Y
Sbjct: 280 PDGSKVAY 287



 Score = 45.8 bits (107), Expect = 4e-09
 Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 13/133 (9%)

Query: 226 AWSPDGQTLAYVSFQNGQ-------AEIYMMNIYSGKREKLTSFPRHNGAPRFSPDGKTL 278
           +W+PDG+ + + + +           EIY ++I SG    LTS    + AP  SPDG  +
Sbjct: 226 SWTPDGRAILFSAVRKPDWQQKVFDPEIYTLDIASGAISPLTSREGPDVAPVVSPDGSKV 285

Query: 279 ALV-----LSKTGNLQVYTMDLATRRLTEVTSGRSNNTE-PFWHPDGKSLIFTSDRGGKP 332
           A +          N  +Y M+        +T+    + +  +W  DGKSL    D  G  
Sbjct: 286 AYLGYDDKRLSYQNTYLYVMNRDGSGAHAITASFDRSIDRAYWAADGKSLYAQYDERGVN 345

Query: 333 QIYQVNLSGGETK 345
           ++ +++L G  T+
Sbjct: 346 RLARISLDGHVTE 358



 Score = 41.6 bits (96), Expect = 8e-08
 Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 28/192 (14%)

Query: 196 DPYPYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQNGQAE-----IYMMN 250
           DP  Y L IA   G    L  R + P ++P  SPDG  +AY+ + + +       +Y+MN
Sbjct: 250 DPEIYTLDIAS--GAISPLTSR-EGPDVAPVVSPDGSKVAYLGYDDKRLSYQNTYLYVMN 306

Query: 251 -IYSGKREKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLTEVTSGRSN 309
              SG      SF R      ++ DGK+L     + G  ++  + L    +TE+ SG + 
Sbjct: 307 RDGSGAHAITASFDRSIDRAYWAADGKSLYAQYDERGVNRLARISL-DGHVTELASGLTG 365

Query: 310 NT--EPFWHPD-----GKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLG----GQ 358
                P+   D       +L FTS    +P    V+ SGG++++LT      LG    GQ
Sbjct: 366 TAFDRPYSGGDFSVAANGTLAFTSGSALRPADLSVS-SGGKSRQLTRLNEDFLGHKALGQ 424

Query: 359 I------TPDGK 364
           +       PDG+
Sbjct: 425 VKELAVTAPDGR 436