Pairwise Alignments

Query, 450 a.a., protein TolB from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., component of the Tol biopolymer transport system from Pseudomonas putida KT2440

 Score =  342 bits (877), Expect = 1e-98
 Identities = 182/454 (40%), Positives = 279/454 (61%), Gaps = 26/454 (5%)

Query: 1   MFKRLVFVLMLIGTGFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIA 60
           M KRL  +L+++             +++T G D A PIA+VPF  +G + LPED++ +I 
Sbjct: 1   MIKRLRGLLVMLCCVAGMAVAEEKNILVTSGSDRATPIAVVPFGLQGGSVLPEDIADIIG 60

Query: 61  SDLQRSGKFSPVPTSKMPQTPYSEEQVNFGKWTSMGVDSLLTGTITQNAEGSYVISYQLV 120
           +DL+ SG +SP+P   M   P    +V F  W ++G   ++ G+I  +  G   + Y L 
Sbjct: 61  NDLRNSGYYSPIPRQNMISQPSQASEVIFRDWKALGAQYVMVGSIVPSG-GRLQVQYALF 119

Query: 121 DIVRGQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGER 180
           ++   Q     S A S D                     ++R+ AH IAD  +E+LTG +
Sbjct: 120 NVATEQQVLTGSVAGSTD---------------------QLRDMAHYIADQSFEKLTGIK 158

Query: 181 GAFLTRIAYVVVN--DKDPYPYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVS 238
           GAF TR+ YV       +   Y L+ +DYDG     +L+S++P++SP ++PDG+ +AYVS
Sbjct: 159 GAFSTRMLYVTAERFSTNNTRYTLQRSDYDGARAVTLLQSREPILSPRFAPDGKRIAYVS 218

Query: 239 FQNGQAEIYMMNIYSGKREKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATR 298
           F+  +  I++ NI +G+RE++T+F   NGAP +SPDG  LA VLSK GN  +Y M++A+R
Sbjct: 219 FEQKRPRIFVQNIDTGRREQVTNFEGLNGAPAWSPDGSRLAFVLSKDGNPDIYVMNVASR 278

Query: 299 RLTEVTSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLGGQ 358
           +++ VT+G   NTEPFW  DG +L FTSDRGGKPQIY+ ++SGG  +R+T+ G+ N   +
Sbjct: 279 QISRVTAGPGINTEPFWGKDGNTLYFTSDRGGKPQIYKQSVSGGGAERVTFVGNYNANPK 338

Query: 359 ITPDGKFLVMVNRSD--SGFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYN 416
           ++ D K LVM++R    + F +A QDL+ G+++IL++T LDESP++APNG M+IY++   
Sbjct: 339 LSADEKTLVMIHRQQGFTNFKVAAQDLQRGSVKILSETSLDESPTVAPNGTMLIYATRQQ 398

Query: 417 KANVLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450
              VL +VS++GR +  LP   G VR P+WSP+L
Sbjct: 399 GRGVLMLVSLNGRVRLPLPTAQGEVREPSWSPYL 432