Pairwise Alignments

Query, 450 a.a., protein TolB from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  452 bits (1164), Expect = e-132
 Identities = 216/447 (48%), Positives = 317/447 (70%), Gaps = 22/447 (4%)

Query: 4   RLVFVLMLIGTGFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIASDL 63
           R+ F  +++   ++ + +A + + IT G+DSARPI +VPFKW G    PED+  ++A+DL
Sbjct: 7   RVAFGFLML---WAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADL 63

Query: 64  QRSGKFSPVPTSKMPQTPYSEEQVNFGKWTSMGVDSLLTGTITQNAEGSYVISYQLVDIV 123
           + SGKF+P+  S++PQ P + ++V    W+++G+D+++ G +T N +GSY ++YQLVD  
Sbjct: 64  RNSGKFNPLDRSRLPQQPATAQEVQPTAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTG 123

Query: 124 RGQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGAF 183
               T             VL+++    NK        +R   H  +D V+E+LTG +GAF
Sbjct: 124 GAPGT-------------VLAQNSYKVNK------QWLRYAGHTASDEVFEKLTGIKGAF 164

Query: 184 LTRIAYVVVNDKDPYPYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQNGQ 243
            TRIAYVV  +   +PY+LR++DYDGYN+ +V RS QPLMSPAWSPDG  LAYV+F++G+
Sbjct: 165 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR 224

Query: 244 AEIYMMNIYSGKREKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLTEV 303
           + + +  + +G   ++ SFPRHNGAP FSPDG  LA  LSKTG+L +Y MDLA+ ++ ++
Sbjct: 225 SALVIQTLANGAVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQI 284

Query: 304 TSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLGGQITPDG 363
           T GRSNNTEP W PD ++L FTSD+ G+PQ+Y++N++GG  +R+TW+GSQN    ++ DG
Sbjct: 285 TDGRSNNTEPTWFPDSQTLAFTSDQAGRPQVYKMNINGGAAQRITWEGSQNQDADVSSDG 344

Query: 364 KFLVMVNRSDSGFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYNKANVLSM 423
           KF+VMV+ ++   ++AKQDL TG +Q+L+ T LDE+PS+APNG MVIYSS     +VL++
Sbjct: 345 KFMVMVSSNNGQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNL 404

Query: 424 VSIDGRFKARLPATNGRVRAPAWSPFL 450
           VS DGRFKARLPAT+G+V++PAWSP+L
Sbjct: 405 VSTDGRFKARLPATDGQVKSPAWSPYL 431