Pairwise Alignments

Query, 450 a.a., protein TolB from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., periplasmic protein from Escherichia coli BL21

 Score =  451 bits (1160), Expect = e-131
 Identities = 216/447 (48%), Positives = 315/447 (70%), Gaps = 22/447 (4%)

Query: 4   RLVFVLMLIGTGFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIASDL 63
           R+ F  +++   ++++ +A + +VI  G+DS RPI +VPF+W G    PED+  ++A+DL
Sbjct: 6   RVAFGFLIL---WASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVAADL 62

Query: 64  QRSGKFSPVPTSKMPQTPYSEEQVNFGKWTSMGVDSLLTGTITQNAEGSYVISYQLVDIV 123
           + SGKF+P+  +++PQ P S ++V    W+++G+D+++ G +T N +GSY ++YQLVD  
Sbjct: 63  RNSGKFNPLDRARLPQQPGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTG 122

Query: 124 RGQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGAF 183
               T             VL+++    NK        +R   H  +D V+E+LTG +GAF
Sbjct: 123 GAPGT-------------VLAQNSYKVNK------QWLRYAGHTASDEVFEKLTGIKGAF 163

Query: 184 LTRIAYVVVNDKDPYPYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQNGQ 243
            TRIAYVV  +   +PY+LR++DYDGYN+ +V RS QPLMSPAWSPDG  LAYV+F++G+
Sbjct: 164 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR 223

Query: 244 AEIYMMNIYSGKREKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLTEV 303
           + + +  + +G   ++ SFPRHNGAP FSPDG  LA  LSKTG+L +Y MDLA+ ++ +V
Sbjct: 224 SALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV 283

Query: 304 TSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLGGQITPDG 363
           T GRSNNTEP W PD ++L FTSD+ G+PQ+Y+VN++GG  +R+TW+GSQN    ++ DG
Sbjct: 284 TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDG 343

Query: 364 KFLVMVNRSDSGFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYNKANVLSM 423
           KF+VMV+ +    ++AKQDL TG +Q+L+ T LDE+PS+APNG MVIYSS     +VL++
Sbjct: 344 KFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNL 403

Query: 424 VSIDGRFKARLPATNGRVRAPAWSPFL 450
           VS DGRFKARLPAT+G+V+ PAWSP+L
Sbjct: 404 VSTDGRFKARLPATDGQVKFPAWSPYL 430