Pairwise Alignments

Query, 450 a.a., protein TolB from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., translocation protein TolB from Alteromonas macleodii MIT1002

 Score =  526 bits (1355), Expect = e-154
 Identities = 252/450 (56%), Positives = 341/450 (75%), Gaps = 3/450 (0%)

Query: 3   KRLVFVLMLIGTGFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIASD 62
           K+L   + LI   FS    A+LE+VIT+G+DSARPI +VPFKW+G   +P D+S V+ +D
Sbjct: 2   KKLGLWIALITMAFSAKVFASLEIVITEGVDSARPIGVVPFKWKGQGSMPGDISKVVMAD 61

Query: 63  LQRSGKFSPVPTSKMPQTPYSEEQVNFGKWTSMGVDSLLTGTITQNAEGSYVISYQLVDI 122
           L RSGKF+PV   KMPQ P + EQV+F  W ++GVD++L G+I       Y++SY+L+D+
Sbjct: 62  LMRSGKFNPVSVDKMPQYPETAEQVSFTAWATLGVDTVLVGSIEPQGGDRYLVSYELIDV 121

Query: 123 VRGQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGA 182
           ++GQ+  GQ+K L +DG LV S DHVL  + A +     R+YAHRI+D+VYE+LTG RGA
Sbjct: 122 LKGQVDNGQAKVL-KDGNLVSSNDHVLAARQAVINGRDFRQYAHRISDIVYEKLTGVRGA 180

Query: 183 FLTRIAYVVVNDKDPY--PYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQ 240
           FLT+IAYV+V D+D    PYQL IADYDG NE  +L S +PLMSP WSPDG+ LAYVSF+
Sbjct: 181 FLTKIAYVIVRDRDTVEKPYQLVIADYDGENETRLLSSPEPLMSPVWSPDGEKLAYVSFE 240

Query: 241 NGQAEIYMMNIYSGKREKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRL 300
           N + +I++ NIY+ +R ++T FP  N +P FSPDGK LA+VLSK GN ++Y MDLAT+ L
Sbjct: 241 NRRPQIFIQNIYTSERTRITDFPGINSSPVFSPDGKQLAMVLSKDGNPELYVMDLATKNL 300

Query: 301 TEVTSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLGGQIT 360
             VT  R+ +TEP W PDG  LIF+S+RGGKPQIY VNL+ G+ +R+T+ G QNLGG I+
Sbjct: 301 RRVTRNRAIDTEPAWLPDGSGLIFSSERGGKPQIYSVNLNSGKVRRVTFVGEQNLGGTIS 360

Query: 361 PDGKFLVMVNRSDSGFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYNKANV 420
           PDGK ++MVN+++  +++AKQ L+ G+ Q+LT+T LDESPS+APNG M+IYS+++    V
Sbjct: 361 PDGKQMIMVNQTNGNYHIAKQSLDGGSPQVLTRTYLDESPSVAPNGSMIIYSTLHEGTQV 420

Query: 421 LSMVSIDGRFKARLPATNGRVRAPAWSPFL 450
           LS+VS+DGRFKARLPA NG+V++P+WSPFL
Sbjct: 421 LSLVSLDGRFKARLPAANGQVKSPSWSPFL 450