Pairwise Alignments

Query, 450 a.a., protein TolB from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., translocation protein TolB from Agrobacterium fabrum C58

 Score =  224 bits (572), Expect = 3e-63
 Identities = 146/450 (32%), Positives = 231/450 (51%), Gaps = 26/450 (5%)

Query: 4   RLVFVLMLIGTGFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIASDL 63
           RLV  +  + + FS  A A +E+ I  G     PIAI  F    +  +   VSAVIA+DL
Sbjct: 8   RLVLAIAALMSVFSAPAFARVEININKGNVEPLPIAITDFM--SSDGIGAQVSAVIAADL 65

Query: 64  QRSGKFSPVPTSK-MPQTPYSEEQVNFGKWTSMGVDSLLTGTITQNAEGSYVISYQLVDI 122
           QRSG F+PV  +  + +    ++Q  F  W  +   +L+TG +T+ ++G     ++L D 
Sbjct: 66  QRSGLFAPVNKNAFIEKISNPDQQPRFEDWKVINAQALVTGRVTRESDGRLRAEFRLWDT 125

Query: 123 VRGQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGA 182
             GQ   GQ                    +  T P +  R  AH IAD +YE +TGE+G 
Sbjct: 126 FAGQQLSGQ--------------------QFFTQPEN-WRRVAHIIADAIYERVTGEKGY 164

Query: 183 FLTRIAYVVVND-KDPYPYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQN 241
           F TR+ +V  +  K     QL I D DG+N R +  S   +++P +SP+ Q + Y+SF+ 
Sbjct: 165 FDTRVVFVSESGPKTARKRQLSIMDQDGFNVRNLTNSNDIVLTPRFSPNRQEVTYMSFEG 224

Query: 242 GQAEIYMMNIYSGKREKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLT 301
            Q  +Y++ + +G+RE + +FP    +PRFSPDG+ + + L + GN  +YTMDL +R  T
Sbjct: 225 QQPRVYLLQLETGQREVVGNFPGMTFSPRFSPDGQKVIMSLQQDGNANIYTMDLRSRTTT 284

Query: 302 EVTSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLGGQITP 361
            +T+  + +T P + PDG+ + F SDRGG+ QIY +N  G   +R+++          +P
Sbjct: 285 RLTNTAAIDTAPSYSPDGQRVAFESDRGGRQQIYVMNADGSGQQRVSFGDGSYSTPVWSP 344

Query: 362 DGKFLVMVNRSDSGFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYNKANVL 421
            G  +    +S   F++     +    +ILT    +E P+ APNG ++++      A   
Sbjct: 345 RGDLIAFTKQSGGKFSIGVMKTDGSGERILTSGFHNEGPTWAPNGRVLMFFRQNAGAGGP 404

Query: 422 SMVSID-GRFKARLPATNGRVRAPAWSPFL 450
            + SID   +  +L  T      PAWSP L
Sbjct: 405 QLYSIDLTGYNEQLIKTPTFASDPAWSPLL 434