Pairwise Alignments

Query, 254 a.a., tol-pal system protein YbgF from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., periplasmic subunit of the TolQRA transport system from Pseudomonas putida KT2440

 Score = 98.6 bits (244), Expect = 1e-25
 Identities = 68/212 (32%), Positives = 112/212 (52%), Gaps = 16/212 (7%)

Query: 58  QLQMQKQLDDMALEVNELRGQIEKNNYDMQQMLQRQRELFVELDRVRGEMKSP------S 111
           Q Q+  QL  M  +++  +G IE+   D+ +M Q   E + +LDR      +P      S
Sbjct: 56  QGQLFMQLQQMQDQLSRQQGIIEELQNDVSRMKQENLERYQDLDRRINSGAAPAATPDNS 115

Query: 112 SGAGQ---LPTSSNDEAAQGTFSSD-----ANEQAAYQNAVDLILKKRDYAGAIAAFQKF 163
           SG G     P ++   AAQ    S      A E+  Y  A DLI K++D+  A  AF  F
Sbjct: 116 SGGGASNAAPDAAAGAAAQQPAGSSQPGDPAKEKLYYDAAFDLI-KQKDFDKASQAFNAF 174

Query: 164 QTDYPNSTFSANAHYWLGQLYFAKKEDKEAAKSFAAVVSDKGSNKRA-DALVKLGDIAKR 222
              YPNS ++ NA YWLG++  AK + + A+++FA V      + +  D+L KL D+ +R
Sbjct: 175 LRKYPNSQYAGNAQYWLGEVNLAKGDLQGASQAFAQVSQKYPKHSKVPDSLYKLADVERR 234

Query: 223 NNNAEQARKFYQQAVDEYPDSASAKIAKENLK 254
             + ++ +   QQ V +YP +++A++A+ +L+
Sbjct: 235 MGHTDKVKGILQQVVTQYPGTSAAQLAQRDLQ 266