Pairwise Alignments

Query, 254 a.a., tol-pal system protein YbgF from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  145 bits (367), Expect = 6e-40
 Identities = 89/265 (33%), Positives = 147/265 (55%), Gaps = 18/265 (6%)

Query: 1   MFSNLKH--VVMLMLLASAASYALAAPAPVSDLGSNVSGGSRSSEIERLERLLESRNLVQ 58
           M SN +H  + + +L+  AA +A  A AP+S +GS    GS    + +LER+  + + + 
Sbjct: 1   MSSNFRHHLLSLSLLVGIAAPWAAFAQAPISSVGS----GSVEDRVTQLERISNAHSQLL 56

Query: 59  LQMQKQLDDMALEVNELRGQIEKNNYDMQQMLQRQRELFVELDRVR---------GEMKS 109
            Q+Q+QL D   +++ LRGQI++N Y + Q+++RQ+++ ++L  +          G+   
Sbjct: 57  TQLQQQLSDNQSDIDSLRGQIQENQYQLNQVMERQKQIMLQLGSLNNGGAAQPAAGDQSG 116

Query: 110 PSSGAGQLPTSSNDEAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFQKFQTDYPN 169
            ++ A   P +    +     S DAN    Y  A+ L+  K     AI AFQ F   YP+
Sbjct: 117 AATTATPAPDAGTATSGAPVQSGDANTD--YNAAIALVQDKSRQDDAIVAFQNFIKKYPD 174

Query: 170 STFSANAHYWLGQLYFAKKEDKEAAKSFAAVVSD-KGSNKRADALVKLGDIAKRNNNAEQ 228
           ST+  NA+YWLGQL + K +  +AA  FA+VV +   S K ADA+ K+G I +   +  +
Sbjct: 175 STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMYKVGVIMQDKGDTAK 234

Query: 229 ARKFYQQAVDEYPDSASAKIAKENL 253
           A+  YQQ +++YP +  AK A++ L
Sbjct: 235 AKAVYQQVINKYPGTDGAKQAQKRL 259