Pairwise Alignments

Query, 254 a.a., tol-pal system protein YbgF from Vibrio cholerae E7946 ATCC 55056

Subject, 996 a.a., DNA uptake lipoprotein from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 54.3 bits (129), Expect = 1e-11
 Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 11/126 (8%)

Query: 131 SSDANE--QAAYQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAHYWLGQLYFAKK 188
           S+  NE  Q     A   +   + Y  AI AFQ + ++YPNS     A Y++G  Y   +
Sbjct: 719 SNPGNESVQGVEYEAAKNLFFGQSYQQAIRAFQTYLSNYPNSAQKQEATYFIGDAYLRLE 778

Query: 189 EDKEAAKSFAAVVSDKGSNKRADALVKLGDIAKRNNNAEQARKFYQQAVDEYPDSASAKI 248
           ++++A ++F  +     S++RA A+ ++ +I       E  RK YQQA+  +    S K+
Sbjct: 779 QEEKALETFYQLEKMGASSQRAKAIQRIAEI-------EFNRKNYQQAIPYF--ITSTKV 829

Query: 249 AKENLK 254
           A++ ++
Sbjct: 830 ARDRIE 835



 Score = 36.6 bits (83), Expect = 2e-06
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 7/108 (6%)

Query: 139 AYQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSA--NAHYWLGQLYFAKKEDKEAAKS 196
           A+    +    K D  GAI A+++       S   A   +HY LG  YF  +E  +A + 
Sbjct: 466 AFYRKGEAFAAKEDLKGAITAYEQVMNMRLTSLDPALIKSHYGLGYAYFNTQEYAKAERQ 525

Query: 197 FAAVVS--DKGSNKRA---DALVKLGDIAKRNNNAEQARKFYQQAVDE 239
           F +      K SN ++   DAL++LGD        + A   +  A+ E
Sbjct: 526 FKSYTDKIKKVSNVQSYYDDALIRLGDCYYIQKKFDPALSTFHLAISE 573



 Score = 34.3 bits (77), Expect = 1e-05
 Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 4/112 (3%)

Query: 134 ANEQAAYQNAVDLILKKRDYAGAIAAFQKFQTDYPNSTFSANAHYWLGQLYFAKKEDKEA 193
           ANE A      D    KR Y  +I A+     D       +  ++  G  YF  K+   A
Sbjct: 100 ANEAAFLMG--DYYFDKRHYKKSIEAYNLVNVDVVTFEQRSKVYFKTGYAYFQLKDYANA 157

Query: 194 AKSFAAVVSDKGSNKRADALVKLGDIAKRNNNAEQARKFYQQAVDEYPDSAS 245
           A+ F   V    ++   D     G +A   N  +QA   ++QA D YP+  S
Sbjct: 158 ARYFDP-VKKMQTSYTGDGYYYGGYVALEQNKYDQAIADFKQA-DRYPEYQS 207



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 162 KFQTDYPNSTFSANAHYWLGQLYFAKKEDKEAAKSFAAVVSD 203
           K   DYPN   +  A + +G  YF K+  K++ +++  V  D
Sbjct: 89  KIIMDYPNDPKANEAAFLMGDYYFDKRHYKKSIEAYNLVNVD 130