Pairwise Alignments

Query, 254 a.a., tol-pal system protein YbgF from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., periplasmic TolA-binding protein from Escherichia coli BL21

 Score =  145 bits (367), Expect = 6e-40
 Identities = 92/266 (34%), Positives = 148/266 (55%), Gaps = 19/266 (7%)

Query: 1   MFSNLKHVVMLM--LLASAASYALAAPAPVSDLGSNVSGGSRSSEIERLERLLESRNLVQ 58
           M SN +H ++ +  L+  AA +A  A AP+S +GS    GS    + +LER+  + + + 
Sbjct: 1   MSSNFRHQLLSLSLLVGIAAPWAAFAQAPISSVGS----GSVEDRVTQLERISNAHSQLL 56

Query: 59  LQMQKQLDDMALEVNELRGQIEKNNYDMQQMLQRQRELFVELDRVRG------EMKSPSS 112
            Q+Q+QL D   +++ LRGQI++N Y + Q+++RQ+++ +++D +           S  S
Sbjct: 57  TQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLSSGGAAAQSTSSDQS 116

Query: 113 GAGQLPTSSND----EAAQGTFSSDANEQAAYQNAVDLILKKRDYAGAIAAFQKFQTDYP 168
           GA    T + D     A     S DAN    Y  A+ L+  K     A+ AFQ F  +YP
Sbjct: 117 GAAASTTPTADAGTANAGAPVKSGDANTD--YNAAIALVQDKSRQDDAMVAFQNFIKNYP 174

Query: 169 NSTFSANAHYWLGQLYFAKKEDKEAAKSFAAVVSD-KGSNKRADALVKLGDIAKRNNNAE 227
           +ST+  NA+YWLGQL + K +  +AA  FA+VV +   S K ADA+ K+G I +   +  
Sbjct: 175 DSTYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTA 234

Query: 228 QARKFYQQAVDEYPDSASAKIAKENL 253
           +A+  YQQ + +YP +  AK A++ L
Sbjct: 235 KAKAVYQQVISKYPGTDGAKQAQKRL 260