Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  234 bits (597), Expect = 9e-66
 Identities = 144/404 (35%), Positives = 233/404 (57%), Gaps = 22/404 (5%)

Query: 315 EGEIIDIRYKSQDEIRHLIDTFNQKTIYLEAEKVKAQASTKAKSAFLATLSHEIRTPMNG 374
           E  I DI +K  +E++ L++    +T  L   +  A+ + ++KS FLA +SHE+RTP+N 
Sbjct: 175 ERAISDIEHK--EELQKLVEI---RTRELRLAQKLAEQANQSKSNFLAMMSHELRTPLNA 229

Query: 375 VLGTAQILLKDELTSKQRQHLTSLYESGEHMMSLLNEILDYSKIEQGKFELDHSAFPLKS 434
           VLG   IL + ELTS Q + L  +  S E ++ ++N+ILD S+IE G F L      L+ 
Sbjct: 230 VLGLIDIL-RGELTSYQVELLEQMENSAELLLIIINDILDLSRIESGHFSLHCHWLDLEK 288

Query: 435 IIGSIKSIYSSLCVEKGLKFQLNSEITDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVA 494
            +      +  +  +KG+ F + S       YY D ARL QI+FN++ NA+KFT+ G V 
Sbjct: 289 KLDQSLVYHRQIAQDKGVHFYVQSNKNPTLEYYTDSARLTQILFNIVGNAIKFTKQGQVD 348

Query: 495 IGLSEESCDEENYLIIKVQDTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQ 554
           + L       ++ ++ +V+DTGIGI +  + ++F PF QA++  TR +GGTGLGLAI K 
Sbjct: 349 VVLDYT----KDGVVFRVKDTGIGIEKNRVEQLFTPFIQADNSITRNYGGTGLGLAITKH 404

Query: 555 IAELMNGTVLVQSEVGQGSCFKVRVKLAITEPVTEDVKPTKAKTYPGLRV-----LIVED 609
           + ELM GT+ V+SE G G+ F + + L   +   +++KP+ + +   + V     L+VED
Sbjct: 405 LVELMGGTIQVESEFGIGTTFTLYIPL---QSRLKNIKPSTSSSQQIVNVKNHHILVVED 461

Query: 610 NRTNIMILEAFMRNKGFECHSVMDGVQAITALQESS-FDLVLMDNHMPLKDGIQATREIR 668
            +TN M+++  +   G++     +G+QA+  L+++  FDLVLMD  MP+ DGI AT+ +R
Sbjct: 462 TKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMDISMPIMDGIAATKILR 521

Query: 669 QLPLPQAKILLFGCTADVFKDTRDKMLSAGADDIIAKPIAEHEL 712
                  +I +   TA      +   + AG +DI+ KPI   ++
Sbjct: 522 D---KHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSKDI 562