Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  225 bits (573), Expect = 1e-62
 Identities = 136/382 (35%), Positives = 220/382 (57%), Gaps = 11/382 (2%)

Query: 332 LIDTFNQKTIYLEAEKVK--AQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTS 389
           L+D   +K +  E  K K  A A ++AK  FLA +SHEIRTPMN +LG A + L   L +
Sbjct: 580 LLDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDT 639

Query: 390 KQRQHLTSLYESGEHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVE 449
            QR+++T + ES ++++ ++N+ILD+SK+E GK  ++   F L  ++ ++ ++ S    E
Sbjct: 640 TQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQE 699

Query: 450 KGLKFQLNSEITDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEENY-L 508
           KG++F ++ +        GD  RL Q++ NL  NAVKFT  G + +       +E+   L
Sbjct: 700 KGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTL 759

Query: 509 IIKVQDTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSE 568
              V+DTGIGIAQ+ L  +F  F QA++  TR++GGTGLGL+I KQ+ ELM G + V SE
Sbjct: 760 RFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSE 819

Query: 569 VGQGSCFKVRVKLAITEPVTEDVKPTKAKTYPGL---RVLIVEDNRTNIMILEAFMRNKG 625
            G+GS F+  V   + +    D+    ++   GL   RVL+V+DN +   IL++ +    
Sbjct: 820 EGKGSTFEFSVVCGLQDAKMRDI----SQPVHGLADKRVLVVDDNDSARHILDSLLTAMR 875

Query: 626 FECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTAD 685
           F   +V +G +A++ +Q+  FD++ +D +MP  +GI+    ++ L L +  +  F  TA 
Sbjct: 876 FNVVTVSNGFEALSEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLGL-RGHMKSFLVTAY 934

Query: 686 VFKDTRDKMLSAGADDIIAKPI 707
             +   D   S   D +I KP+
Sbjct: 935 GREINLDGENSKLVDALIVKPV 956



 Score = 65.1 bits (157), Expect = 2e-14
 Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 6/151 (3%)

Query: 588  TEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQESSFD 647
            T +        + G  +L+VEDN  N  +    +++ G        G +A+  L+ + FD
Sbjct: 978  TNEAHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFD 1037

Query: 648  LVLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTADVFKDTRDKMLSAGADDIIAKPI 707
            LVLMD  MP+ DGI AT  IR  P   + + +   TA+      ++ L AG +D ++KPI
Sbjct: 1038 LVLMDMQMPVMDGITATEHIRANPRWHS-LPIVAMTANAMAIDIERCLQAGMNDHLSKPI 1096

Query: 708  AEHE----LDMALEQHSERLYQFHREPSLPS 734
               +    L   L+   E+ +  H  P+ PS
Sbjct: 1097 EVDKFYQVLRHFLQVSDEQSFSSH-SPNKPS 1126