Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 947 a.a., Hybrid sensory histidine kinase from Sphingobium sp. HT1-2

 Score =  209 bits (532), Expect = 5e-58
 Identities = 138/404 (34%), Positives = 213/404 (52%), Gaps = 12/404 (2%)

Query: 343 LEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESG 402
           LEA   +A+ + +AKS FLA +SHEIRTPMN +LG   ++ + +L  KQ+ ++  + ++G
Sbjct: 187 LEARTREAEEANRAKSLFLANMSHEIRTPMNAILGFCHLVARTDLDPKQQDYIGKINQAG 246

Query: 403 EHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNSEITD 462
             ++ L+N+ILD+SK E GK  L+   F L+S I +   + ++    K ++     +   
Sbjct: 247 VSLLRLINDILDFSKNEAGKLTLEAHPFTLRSAIENQIQLVAANAEAKQVRVVSRVDADV 306

Query: 463 GRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEENYLIIKVQDTGIGIAQE 522
                GD+ R  Q++ NL+SNAVKF+E G V IGLS    +    L + V+DTGIG+  E
Sbjct: 307 PERLIGDEMRFCQVVLNLMSNAVKFSEEGTVTIGLSASEQNGRVRLKLTVRDTGIGMTPE 366

Query: 523 SLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVKLA 582
               +F  F QA+S TTRRFGGTGLGLAI +QI E M G + V+S  GQGS F   + + 
Sbjct: 367 QQKSLFHSFTQADSSTTRRFGGTGLGLAICRQIVEQMGGDIAVESAPGQGSSFICHMLMD 426

Query: 583 ITEPVTEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQ 642
             +       P  A     LRVL  +DN  +  I+       G     V  G +AI A++
Sbjct: 427 ADDRAMGLEMPMSAHV-RRLRVLAADDNPASRQIIHDVFAGWGMAVDLVASGGEAIAAIE 485

Query: 643 ESS-----FDLVLMDNHMPLKDGIQATREIRQLPL--PQAKILL---FGCTADVFKDTRD 692
            +      +DL L+D  MP  DG++    +R   L  PQ K L+   +G    +     D
Sbjct: 486 HADERGEPYDLALLDWKMPGLDGMETVDALRATALRHPQPKALIITAYGADDLLQGVDTD 545

Query: 693 KMLSAGADDIIAKPIAEHELDMALEQHSERLY-QFHREPSLPSV 735
           K+ +     ++ K + +   ++  E+H+  ++      P+LP V
Sbjct: 546 KVAAFLTKPVVPKILLDTITEIFAEEHAPVVHVAASATPALPMV 589



 Score = 60.5 bits (145), Expect = 4e-13
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 3/128 (2%)

Query: 593 PTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQE--SSFDLVL 650
           P  A+   GLRVL+VEDN  N  I    + + G +     +G  A   ++E  + +  VL
Sbjct: 587 PMVAEALRGLRVLLVEDNEINREIAAELLDDAGLKVDFAENGRIACDMVREKGAGYAAVL 646

Query: 651 MDNHMPLKDGIQATREIRQLPLPQAKILLFGCTADVFKDTRDKMLSAGADDIIAKPIAEH 710
           MD  MP  DGI ATR IR+       + +   TA  +++ + +  +AG +D IAKP+   
Sbjct: 647 MDVQMPEMDGISATRIIRE-QWNAEDLPIIAMTAHAYEEEKQRCKAAGMNDHIAKPVEPP 705

Query: 711 ELDMALEQ 718
            L   L++
Sbjct: 706 VLVRVLDR 713