Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., Sensor histidine kinase RcsC from Pseudomonas sp. DMC3

 Score =  270 bits (689), Expect = 2e-76
 Identities = 151/378 (39%), Positives = 230/378 (60%), Gaps = 11/378 (2%)

Query: 349 KAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESGEHMMSL 408
           +A+ +  AKS FLA +SHE+RTPMNGVLG  Q+L   E+T +Q ++     ES EH++ +
Sbjct: 257 EAEKANNAKSDFLAMMSHELRTPMNGVLGMLQLLETTEMTEEQVEYAALASESTEHLLKV 316

Query: 409 LNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNSEITD---GRW 465
           +N+ILD+S+IE+ + EL+H  F L  +IG+    +    V++GL   LN  I D   G  
Sbjct: 317 INDILDFSRIERSELELEHIPFNLAELIGACAQSFQHSAVQRGL--ALNLRIPDDMRGLQ 374

Query: 466 YYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEE-NYLIIKVQDTGIGIAQESL 524
             GD  R+RQI+ NL+ NA+KFTE G V+I    +S D E  +    V+D+GIGI+ ESL
Sbjct: 375 VQGDPTRIRQILVNLVGNALKFTEQGRVSIEAQWQSLDHELLWFTCSVRDSGIGISSESL 434

Query: 525 GRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVKLAIT 584
             +F  F+QA+S  +RR+GGTGLGL I + +AE M GT+  QSE G+GS F + + LA+ 
Sbjct: 435 ELMFNAFQQADSSISRRYGGTGLGLPIARTLAERMGGTLRAQSEEGRGSVFTLEIPLALY 494

Query: 585 EPVTEDVKPTK----AKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITA 640
           +     +   +    +    G  VL+VEDN  N  ++EA +R+ GF      DG QA+ +
Sbjct: 495 KQAMPALAAPRTLNGSGQGEGRHVLLVEDNPVNQTVIEAMLRSLGFAVSVATDGAQAVRS 554

Query: 641 LQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTADVFKDTRDKMLSAGAD 700
            +   F+++LMD  +P+ DG +ATR+IR LP  +  + +   TA+  +  R+  L+AG +
Sbjct: 555 AEGGEFEVILMDCRLPIIDGYEATRQIRDLP-GRRDVPIIALTANALQGDRETCLAAGMN 613

Query: 701 DIIAKPIAEHELDMALEQ 718
           D +AKP   ++L   L++
Sbjct: 614 DYLAKPFKRNDLQQILQR 631