Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 890 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  216 bits (551), Expect = 3e-60
 Identities = 138/387 (35%), Positives = 213/387 (55%), Gaps = 19/387 (4%)

Query: 329 IRHLIDTFNQKTIYLEAEKVK--AQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDE 386
           I  L+D  N++T    A + +  A+ + +AK+AFLAT+SHEIRTPMNGV+G   +LL  +
Sbjct: 228 IARLLD--NRETAMATARQAQQVAERANQAKAAFLATMSHEIRTPMNGVIGMTGLLLDTQ 285

Query: 387 LTSKQRQHLTSLYESGEHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSL 446
           L  +QR   T++ +S E +++++N+ILD+SK+E GK +L+ + F L  ++ SI  I +  
Sbjct: 286 LDPEQRHFATTIRDSAESLLTVINDILDFSKLEAGKLDLESTDFELVGLVESIVDILAPR 345

Query: 447 CVEKGLKFQLNSEITDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEE-SCDEE 505
              KG++     +     W  GD  RLRQI+ NL  NA+KFT  G ++I + +E S D  
Sbjct: 346 AHAKGIEIASMVDPDLPAWVRGDPGRLRQILMNLAGNAIKFTSHGGISIEVRDETSPDGA 405

Query: 506 NYLIIKVQDTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLV 565
             L   V+DTGIGI Q+++GR+F  F Q ++ T RR+GGTGLGLAI K++ E+M GT+ V
Sbjct: 406 GRLRFDVRDTGIGIPQDAIGRLFSMFMQVDASTARRYGGTGLGLAISKRLTEMMGGTIGV 465

Query: 566 QSEVGQGSCFKVRVKLAITEPVTEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKG 625
           +S  G GS F   +   + E       P +     G R+L+V+D+  N  +LE  +R  G
Sbjct: 466 ESTPGAGSLFWFSLPFQMVE-----TAPPQRPDLAGRRILVVDDSPINRDVLERQLRGFG 520

Query: 626 FECHSVMDGVQAITALQESS-----FDLVLMDNHMPLKDGIQATREIRQLPLPQAKILLF 680
               S  D   A+  L  ++     ++  ++D  MP   G      IR  P+     L+ 
Sbjct: 521 VIVASCADAESALAELGRAAATGTPWEAAIIDARMPGVTGSDLIGRIRAEPVLAPMGLII 580

Query: 681 GCTADVFKDTRDKMLSAGADDIIAKPI 707
             +  +  +      S  AD  I KP+
Sbjct: 581 ASSQGLSPEDG----SPKADAFIHKPL 603



 Score = 75.5 bits (184), Expect = 1e-17
 Identities = 42/119 (35%), Positives = 61/119 (51%)

Query: 602 LRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGI 661
           LR+L+ EDN  N  +    +R  G       DG +A+ A++   +DLVLMD  MP  DG+
Sbjct: 642 LRILVAEDNPVNQQVAVGLLRKLGHSVDVAADGAEAVEAVRSRPYDLVLMDVQMPEMDGL 701

Query: 662 QATREIRQLPLPQAKILLFGCTADVFKDTRDKMLSAGADDIIAKPIAEHELDMALEQHS 720
           QAT  IR L     ++ +   TA+  +      L AG D  I+KPI   +L   L Q++
Sbjct: 702 QATAAIRALTGGAERVPIVAMTANAMRGDDRMCLDAGMDRYISKPIDRRKLMEVLAQYA 760