Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., hybrid sensor histidine kinase/response regulator from Magnetospirillum magneticum AMB-1

 Score =  259 bits (662), Expect = 2e-73
 Identities = 153/381 (40%), Positives = 211/381 (55%), Gaps = 10/381 (2%)

Query: 347 KVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESGEHMM 406
           K KA+ + + K+ FLAT+SHEIRTPMNGVLG   +L    LT  QR HL +   S   ++
Sbjct: 139 KDKAEETARLKANFLATMSHEIRTPMNGVLGMLHLLTGSPLTPDQRDHLETAQSSARALL 198

Query: 407 SLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNSEITDGRWY 466
           +++N+ILD+SK+E G+ +L+ + F L  ++  + ++      +KGL   L    T  R+ 
Sbjct: 199 AIINDILDFSKLEAGQMKLEATKFDLHRLLEEMVALLKGAARDKGLTLSLRIADTVPRYQ 258

Query: 467 YGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEENYLIIKVQDTGIGIAQESLGR 526
            GD  RLRQ++ NL+ NAVKFTE G VA+ +  E  D    L  +V DTGIGI   +   
Sbjct: 259 AGDPTRLRQVLTNLMGNAVKFTEKGDVAVSVEPEESDSSR-LRFEVADTGIGIEPAAAPA 317

Query: 527 IFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVKLAITEP 586
           +F  F QA+S  TRRFGGTGLGL+I K++ E+M G +   S  G+G+ F   + L+   P
Sbjct: 318 LFSEFVQADSSITRRFGGTGLGLSICKRLVEMMGGEIGFDSIPGEGTTFHFTLPLSAALP 377

Query: 587 -----VTEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITAL 641
                  ED  P      P + VL+ EDN  N  +    +   G       +G +AI A+
Sbjct: 378 DQDSGAAEDAGP----DLPPMAVLLAEDNPVNQKLTTTLLDRWGQRVTLARNGAEAIAAV 433

Query: 642 QESSFDLVLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTADVFKDTRDKMLSAGADD 701
               FDLVLMD HMP  DG++ATR IR +  P AKI +   TADV        L AG DD
Sbjct: 434 ARDHFDLVLMDVHMPGIDGLEATRRIRAMSGPVAKIPIIAMTADVMDGDAALCLDAGMDD 493

Query: 702 IIAKPIAEHELDMALEQHSER 722
            +AKP+    L  AL +   R
Sbjct: 494 YVAKPVEPTRLLAALHRAIRR 514



 Score = 25.8 bits (55), Expect = 0.006
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 6/58 (10%)

Query: 50  LRAELLAT---QIREPLNNSIGVLQSLTSIGKSAADK---EEQERMLRSLFSVVGGVI 101
           L+A  LAT   +IR P+N  +G+L  LT    +   +   E  +   R+L +++  ++
Sbjct: 148 LKANFLATMSHEIRTPMNGVLGMLHLLTGSPLTPDQRDHLETAQSSARALLAIINDIL 205