Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 778 a.a., aerobic respiration control sensor histidine protein kinase, cognate to two-component response regulators ArcA and RssB from Escherichia coli BL21

 Score =  216 bits (550), Expect = 4e-60
 Identities = 125/393 (31%), Positives = 221/393 (56%), Gaps = 5/393 (1%)

Query: 317 EIIDIRYKSQDEIRHLIDTFNQKTIYLEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVL 376
           EI  + Y  +   RH +  F +     +  +   + +++ K+ F++T+SHE+RTP+NG++
Sbjct: 243 EIRKVPYYDRVGKRHGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNGIV 302

Query: 377 GTAQILLKDELTSKQRQHLTSLYESGEHMMSLLNEILDYSKIEQGKFELDHSAFPLKSII 436
           G ++ILL  ELT++Q ++L +++ S   + ++ N+I+D  K+E+ K +LD+      S +
Sbjct: 303 GLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPVDFTSFL 362

Query: 437 GSIKSIYSSLCVEKGLKFQLNSEITDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIG 496
             ++++ +    +KGL+F L   +        D  RLRQI++NL+SNAVKFT+ G V + 
Sbjct: 363 ADLENLSALQAQQKGLRFNLEPTLPLPHQVITDGTRLRQILWNLISNAVKFTQQGQVTVR 422

Query: 497 LSEESCDEENYLIIKVQDTGIGIAQESLGRIFRPFEQA-ESHTTRRFGGTGLGLAIVKQI 555
           +     DE + L  +V+D+GIGI Q+ L +IF  + Q  +SH  +   GTG+GLA+ +++
Sbjct: 423 V---RYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHGGKPATGTGIGLAVSRRL 479

Query: 556 AELMNGTVLVQSEVGQGSCFKVRVKLAITEPVTEDVKPTKAKTYPGLRVLIVEDNRTNIM 615
           A+ M G + V SE G+GS F + +         +D         P L VL+VED   N++
Sbjct: 480 AKNMGGDITVTSEQGKGSTFTLTIHAPSVAEEVDDAFDEDDMPLPALNVLLVEDIELNVI 539

Query: 616 ILEAFMRNKGFECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQA 675
           +  + +   G      M G  A+   +   +DLVL+D  +P   G+  +RE+ +    + 
Sbjct: 540 VARSVLEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPRED 599

Query: 676 KILLFGCTADVFKDTRDKMLSAGADDIIAKPIA 708
              L   TA+V KD + + L+AG DD+++KP++
Sbjct: 600 LPPLVALTANVLKD-KQEYLNAGMDDVLSKPLS 631