Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 731 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  237 bits (605), Expect = 1e-66
 Identities = 141/398 (35%), Positives = 213/398 (53%), Gaps = 25/398 (6%)

Query: 344 EAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESGE 403
           EA ++ A+ ++ AKS FLA +SHE+RTPM  V+G   +L+   L  +Q+  + +L  S  
Sbjct: 186 EAARIAAENASSAKSRFLAMMSHELRTPMTAVIGMGDLLMGTGLNDQQKAFVKTLRSSAG 245

Query: 404 HMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNSEITDG 463
            +M++LN++LD+SKIE G+  L+   F L  ++  +  ++      KGL    +      
Sbjct: 246 TLMTILNDVLDFSKIEAGQLTLEEIDFSLPRLVDDVVQLFLVRAAAKGLSLSASIADDTP 305

Query: 464 RWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGL---------------SEESCDEENYL 508
           R   GD  RLRQ++FNL+SNA+KFT+ G + I +                    D    L
Sbjct: 306 RHIRGDPTRLRQVLFNLVSNAIKFTDRGTIEIAVWSPDPPADPPADPPAGAAPADAPVTL 365

Query: 509 IIKVQDTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSE 568
             +V+D GIG+  E   R+F  F QA+  T+R++GGTGLGLAI K++ E M G + V S 
Sbjct: 366 RFEVEDNGIGMTPEQRARLFDAFVQADVSTSRKYGGTGLGLAICKRLVEAMGGEITVAST 425

Query: 569 VGQGSCFKVRV--KLAITEPVTE--------DVKPTKAKTYPGLRVLIVEDNRTNIMILE 618
            G+GS F+  +  +LA   PV E            T   T   LR+L+ EDN  N M++ 
Sbjct: 426 PGRGSTFRFSILSRLAEAPPVGELGARPALPGAAETPEPTQVPLRLLLAEDNDINRMLVV 485

Query: 619 AFMRNKGFECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQAKIL 678
           A M   G    +V DG  A+ AL  + +D +++D  MP+ DG    R IR++  P A+I 
Sbjct: 486 AMMSRIGHRIDAVTDGRAALDALVAADYDALILDMEMPVLDGRSTARAIRRMDGPVARIP 545

Query: 679 LFGCTADVFKDTRDKMLSAGADDIIAKPIAEHELDMAL 716
           + G +AD   + RD  L+AG D  + KPI   +L+  L
Sbjct: 546 IVGLSADALPEHRDGHLAAGLDAYLTKPIDWDQLNAVL 583