Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1111 a.a., Sensory/regulatory protein RpfC from Alteromonas macleodii MIT1002

 Score =  235 bits (599), Expect = 1e-65
 Identities = 132/372 (35%), Positives = 210/372 (56%), Gaps = 13/372 (3%)

Query: 343 LEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESG 402
           L+A K  A+ +  A++AFLA +SHEIRTPMN ++G + ++L + L  +Q+ HLT++  S 
Sbjct: 521 LKAAKENAEQAAAARTAFLANMSHEIRTPMNAIIGFSDLMLGEALREEQKSHLTTINRSA 580

Query: 403 EHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNSEITD 462
             ++ LLN+ILD +K+++GK +LD+  F ++  +  + S +      K +   LN + + 
Sbjct: 581 RSLLHLLNDILDSAKLDKGKLDLDYRDFLIREELDLVISTFWLEAKRKKVGLVLNVDDSV 640

Query: 463 GRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEENYLIIKVQDTGIGIAQE 522
              Y G   R+RQ++ NL+ NAVKFT  G V I +      +E Y+   V DTGIG+ QE
Sbjct: 641 ANGYRGVPERMRQVLNNLIGNAVKFTHEGEVTINVK----SDEKYVYFDVTDTGIGMTQE 696

Query: 523 SLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVKLA 582
            + R+F PF QA++  +R++GGTGLG  I KQ+ ELM G +   SE G+G+ F  R+ L 
Sbjct: 697 QVERVFDPFSQADASMSRKYGGTGLGTTISKQLVELMGGNICATSEKGKGTTFTFRLPLE 756

Query: 583 ITE---PVTEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAIT 639
           + E    V+ ++     +    L VLIV+D + N+ +L   ++  G    +  DG  A+ 
Sbjct: 757 VVEIDDYVSSELSSKAVRIETSLTVLIVDDVQQNLELLSLLLKRAGHSVETATDGQIALD 816

Query: 640 ALQESSFDLVLMDNHMPLKDGIQATREIRQL----PLPQAKILLFGCTADVFKDTRDKML 695
            ++  SFD+VLMD  MP  DG++A ++ R+      LP   I+    TA V    +    
Sbjct: 817 KMRAKSFDVVLMDLQMPKLDGLEAAKKRREFEKENSLPPTPII--ALTASVLVQDKHAAQ 874

Query: 696 SAGADDIIAKPI 707
            AG +    KP+
Sbjct: 875 QAGMEGFANKPV 886