Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1231 a.a., two component sensor kinase/response regulator hybrid from Agrobacterium fabrum C58

 Score =  225 bits (573), Expect = 1e-62
 Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 8/326 (2%)

Query: 349 KAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESGEHMMSL 408
           +A+A+ +AKS FLA +SHEIRTPMNGVLG A++L K +L ++Q+     + +SG  ++++
Sbjct: 674 RAEAADRAKSEFLANMSHEIRTPMNGVLGMAELLAKSKLDTRQKTFTDIIVKSGNALLTI 733

Query: 409 LNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNSEITDGRWYYG 468
           +N+ILD+SKIE G+ +L    F     +  + S+ SS  +EK ++  +  + +      G
Sbjct: 734 INDILDFSKIEAGQMKLRSVPFDPAEAVEDVVSLLSSAALEKDIELIVRIDASVSGKVIG 793

Query: 469 DKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCD-EENYLIIKVQDTGIGIAQESLGRI 527
           D  R RQI+ N++ NAVKFTE G V + LS +S +  E+   ++V+D+GIGI  + L  I
Sbjct: 794 DAGRFRQIVTNIVGNAVKFTETGHVLVELSAQSAEASESIFSLRVEDSGIGIPVDKLETI 853

Query: 528 FRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVKLAITEPV 587
           F  F Q +   TRR  GTGLGLAI   +  L +G + V SEVG+GS F+V +   + E  
Sbjct: 854 FDKFSQVDGSATRRHEGTGLGLAITVGLVGLFDGKINVVSEVGRGSAFEVDIPFQVMER- 912

Query: 588 TEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQES--- 644
             DV P  +     +RVL+++DN  N  IL   +R+ G + H+V +G   I  LQE+   
Sbjct: 913 RRDV-PLLSVAIDDIRVLVIDDNDVNRRILTEQLRSWGIDGHAVENGPSGIAVLQEAASL 971

Query: 645 --SFDLVLMDNHMPLKDGIQATREIR 668
             + D +++D HMP+ +G+     IR
Sbjct: 972 GFAIDAIILDYHMPVMNGLDVVERIR 997



 Score = 65.1 bits (157), Expect = 2e-14
 Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 3/120 (2%)

Query: 602  LRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGI 661
            L VL+ EDN  N ++    ++  G     V +G +A+ A +E +  L+LMD  MP+ +G 
Sbjct: 1098 LDVLVAEDNDVNQIVFSQILQQAGLRFLIVGNGKRAVQAWEEYNPALILMDVSMPVMNGH 1157

Query: 662  QATREIR---QLPLPQAKILLFGCTADVFKDTRDKMLSAGADDIIAKPIAEHELDMALEQ 718
            QAT+ IR   Q       + + G TA   +  R++ L AG DD ++KPI+   L+  + Q
Sbjct: 1158 QATQAIRAAEQAAGDSRHVPVIGVTAHTQEADRERCLEAGMDDYLSKPISPESLEDKIAQ 1217