Pairwise Alignments

Query, 633 a.a., PTS fructose transporter subunit IIC from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

 Score =  242 bits (618), Expect = 3e-68
 Identities = 144/335 (42%), Positives = 195/335 (58%), Gaps = 16/335 (4%)

Query: 288 LMNGVSHMIPFVVTGGLLIALALAVGGEPTEAGMAIPAGSMWNQILEVGVVAFTLMIPIL 347
           L+ G SHM+PF+V GG+L++L++ + G       A+P   +   I ++G+   TL   +L
Sbjct: 182 LLFGTSHMMPFIVAGGVLLSLSVMMSGHG-----AVPEEGVLADIAQMGIAGLTLFTVVL 236

Query: 348 AGYIAYAIADRPALSPGLIGGWIANNGSFYGADAGTGFIGAIIAGLLVGYFVKWITSINY 407
            GYIAY++AD+P L+PG+IG WIA N         TGFIGAII G   G+ V+ +  I  
Sbjct: 237 GGYIAYSMADKPGLAPGMIGTWIAIN------QYQTGFIGAIIVGFFAGFVVRQLKRIAL 290

Query: 408 HKFIQPLVPIMIAPITASLFIAGLFIFVIGAPIASLMDGLTALLTSMSSGNVILLGIVLG 467
              +  L  I I P+  +    G  +++IGAPIAS M  L   L SM+    ++LG VLG
Sbjct: 291 PDSMSSLGSIFIYPLVGTFVTCGAVMWLIGAPIASSMLWLNQFLASMADSGKVVLGAVLG 350

Query: 468 GMAGFDMGGPFNKVAFLFSVGMIASGQTQFMGAMACAIPVAPLGMALATAMGRKLELFES 527
            M  FDMGGP NKVA LF+   + + Q   MG +  AI   PLGMALAT +      F+ 
Sbjct: 351 AMTAFDMGGPINKVATLFAQTQV-NTQPWLMGGVGIAICTPPLGMALATLLSP--SKFKR 407

Query: 528 SELEAGKAAGAMGLVGISEGAIPFAAQDPMSVIPANVLGSMVAAVMAFSFGITNSVAHGG 587
            E EAGKAAG MG++GISEGAIPFAA DP  V+PA + G +V  V+ F F + N    GG
Sbjct: 408 DEREAGKAAGIMGMIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAPWGG 467

Query: 588 PVVALLGAMNYPLLALLCMAAGAGVTAITCVTLKK 622
            +V  L  ++  L  +L   AGA  TA+  + LKK
Sbjct: 468 WIV--LPVVDGKLGYILGTIAGALATALIAIALKK 500



 Score =  180 bits (456), Expect = 2e-49
 Identities = 90/156 (57%), Positives = 116/156 (74%)

Query: 2   INQLINADLIQLDLQANSKQAVFEELINILHAQGRISDKAAFLKDIQAREELGNTGFEDG 61
           I  LI  ++I LDL+AN+K+ V  EL+ +L   G+++DK  FL DI  REE+GNTGFE+G
Sbjct: 3   ITHLIEPEIICLDLKANNKEDVLIELVELLDNAGKLTDKQQFLNDIWRREEIGNTGFEEG 62

Query: 62  VAIPHAKSAAVTQPAVAIGVSREGIDYGAEDGLPSKLFFMIASPDGGDNHHIEVLAELSS 121
           +AIPHAKSAAV  PAV +G+SR+GIDYGAEDG  S +FFM+ASPDG D+HHIEVLA++SS
Sbjct: 63  IAIPHAKSAAVALPAVVVGISRQGIDYGAEDGQLSDVFFMLASPDGEDHHHIEVLAQISS 122

Query: 122 KLIEEGFIEAFLNTKNSEQALELLLKKSAPTPLANQ 157
           KLIEEGF+E     ++ EQAL L +     T  + Q
Sbjct: 123 KLIEEGFVEQLKAAESVEQALALFIHPQHSTLSSTQ 158



 Score = 73.9 bits (180), Expect = 2e-17
 Identities = 38/97 (39%), Positives = 62/97 (63%), Gaps = 1/97 (1%)

Query: 159 ESKGLIIGVTGCPAGIAHTYLAAEALEKGAAALGFEIKVETNGSIGVKNSPSAEEIERAE 218
           E +  I+ VT CP+G+AHT+LAA++LEK A   G +IKVET G+ G+ N  +A++++RA+
Sbjct: 521 EGQADILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAK 580

Query: 219 AIVVACDKQV-DMARFAGKRLIKTNVKAPIRDAQKLI 254
            ++ A D  + +  RF   ++I    K  I +A  L+
Sbjct: 581 LVIFAHDVAIKEPERFKHIKVIDVTTKDAILNAAALV 617