Pairwise Alignments

Query, 279 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., Transcriptional regulator, AraC family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  172 bits (435), Expect = 1e-47
 Identities = 99/277 (35%), Positives = 156/277 (56%), Gaps = 22/277 (7%)

Query: 6   LISSVLNERESFHHIWFAGDFHTPPEFSYQVNFPRLELVLGGEYINEMESHDRKVTKIIA 65
           L+S ++N       I+FA      PE +YQV+FPRLE+VL GE        D  +T  + 
Sbjct: 8   LLSRLINGPLPLRQIYFASASGPAPELAYQVDFPRLEIVLEGELT------DMSITAPLI 61

Query: 66  KAGDAIFIPANCWNKPNWDTDCSVLSMLFGRRQLGLSFVSKRKGEANFYDIQKHSIQTRS 125
              D +++PA  WN P W T  + LS+LFG++QLG S V         +D Q+H   T+ 
Sbjct: 62  PC-DVLYVPAGGWNIPQWQTPVTTLSILFGKQQLGFSVVH--------WDGQQHQNLTKQ 112

Query: 126 GFAIDN------ILEALSSLARENYKKPMDELLLQALLQYTQTMLNAPTEQPQNRVQDLY 179
             A         +L+ L+ +  +  ++    L++ +LL + + +L +   Q  +R + L+
Sbjct: 113 HVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQI-QTASRSRALF 171

Query: 180 QGICIYIQENFHRPITRESIASRFSISANHLSRLFRQQGHMTLADYITWVRVDRAKFMLK 239
           + I  YI E +  P+TRES+A  F IS N+LS LF++ G +   +Y+   R++ AK +LK
Sbjct: 172 EAIREYIDERYAAPLTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLK 231

Query: 240 KYNFKLNEVSLRCGFKDVNYFCRVFKNRTGRTPTDYR 276
            Y+ K+ EV+ RCGF D NYFCR+F+  T R+P++YR
Sbjct: 232 GYDLKVKEVAHRCGFVDSNYFCRLFRKNTERSPSEYR 268