Pairwise Alignments

Query, 279 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  169 bits (428), Expect = 6e-47
 Identities = 92/271 (33%), Positives = 152/271 (56%), Gaps = 10/271 (3%)

Query: 6   LISSVLNERESFHHIWFAGDFHTPPEFSYQVNFPRLELVLGGEYINEMESHDRKVTKIIA 65
           L+S ++N   S   I+FA      P+ +YQV+FPRLE+VL GE+++              
Sbjct: 8   LLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAG-------ATL 60

Query: 66  KAGDAIFIPANCWNKPNWDTDCSVLSMLFGRRQLGLSFVSKRKGEANFYDIQKHSIQTRS 125
             GD +++PA  WN P W    +  S+LFG++QLG S V  +     + ++ K  +  R 
Sbjct: 61  VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVV--QWDGKQYQNLAKQHVARRG 118

Query: 126 GFAIDNILEALSSLARENYKKPMDELLLQALLQYTQTMLNAPTEQPQNRVQDLYQGICIY 185
                 +L+ L+ +  +  ++    L++ +LL + + +L +   Q  +R Q L++ I  Y
Sbjct: 119 PRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQI-QTASRSQALFEAIRDY 177

Query: 186 IQENFHRPITRESIASRFSISANHLSRLFRQQGHMTLADYITWVRVDRAKFMLKKYNFKL 245
           I E +   +TRES+A  F IS N+LS LF++ G +   +Y+   R++ AK +LK Y+ K+
Sbjct: 178 IDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKV 237

Query: 246 NEVSLRCGFKDVNYFCRVFKNRTGRTPTDYR 276
            EV+  CGF D NYFCR+F+  T R+P++YR
Sbjct: 238 KEVAHACGFVDSNYFCRLFRKNTERSPSEYR 268