Pairwise Alignments

Query, 279 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., transcriptional activator of rhaSR from Escherichia coli BL21

 Score = 67.4 bits (163), Expect = 4e-16
 Identities = 38/133 (28%), Positives = 59/133 (44%)

Query: 144 YKKPMDELLLQALLQYTQTMLNAPTEQPQNRVQDLYQGICIYIQENFHRPITRESIASRF 203
           +   M ELL   L+             P    + L   +   +  +   P   +      
Sbjct: 173 FANEMGELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEA 232

Query: 204 SISANHLSRLFRQQGHMTLADYITWVRVDRAKFMLKKYNFKLNEVSLRCGFKDVNYFCRV 263
           S S   L + FRQQ  MT+  Y+  VRV  A+++L+     ++++S  CGF+D NYF  V
Sbjct: 233 SCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVV 292

Query: 264 FKNRTGRTPTDYR 276
           F   TG TP+ +R
Sbjct: 293 FTRETGMTPSQWR 305