Pairwise Alignments

Query, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

Subject, 580 a.a., PTS fructose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

 Score =  234 bits (597), Expect = 8e-66
 Identities = 137/327 (41%), Positives = 200/327 (61%), Gaps = 8/327 (2%)

Query: 172 AQRLARVKEHLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPEEGVLADIAQMGIAGLTL 231
           A+    V +HL+ G SHM+P +VAGG++++LS +  G  A  EEG LA  A M I G + 
Sbjct: 238 AEEKKGVYKHLMTGVSHMLPVVVAGGLIIALSFVF-GIEAFKEEGTLA-AALMQIGGGSA 295

Query: 232 FTV---VLGGYIAYSMADKPGLAPGMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQLK-R 287
           F +   VL GYIA+S+AD+PGLAPG+IG  +A +    GF+G I+ GF AG+  + +  +
Sbjct: 296 FALMIPVLAGYIAFSIADRPGLAPGLIGGMLA-SSTGAGFLGGIVAGFLAGYSAKFIADK 354

Query: 288 IALPDSMSSLGSIFIYPLVGTFVTCGAVMWLIGAPIASSMLWLNQFLASMADSGKVVLGA 347
           + LP SM++L  I I P + +  T   +++++G P++S M  +  FL +M  +  ++LG 
Sbjct: 355 VQLPQSMAALKPILIIPFIASLFTGLVMIYVVGGPMSSIMSGMTSFLNNMGSTNAILLGI 414

Query: 348 VLGAMTAFDMGGPINKVATLFAQTQVNTQPWL-MGGVGIAICTPPLGMALATLLSPSKFK 406
           VLGAM  FD+GGP+NK A  F    + +Q +  M  +  A   P LGM LAT ++  KF+
Sbjct: 415 VLGAMMCFDLGGPVNKAAYTFGVGLLASQTYAPMAAIMAAGMVPALGMGLATFIAKDKFE 474

Query: 407 RDEREAGKAAGIMGMIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAPWG 466
             EREAGKA+ ++G+  ISEGAIPFAA DP RV+PA + GG V   +  LF     AP G
Sbjct: 475 AGEREAGKASFVLGLCFISEGAIPFAAKDPMRVIPACMVGGAVTGALSMLFGAKLMAPHG 534

Query: 467 GWIVLPVVDGKLGYILGTIAGALATAL 493
           G  VL + +     +L  +A A+ TA+
Sbjct: 535 GLFVLLIPNAISPVLLYLVAIAVGTAI 561



 Score = 69.3 bits (168), Expect = 4e-16
 Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 1/103 (0%)

Query: 504 EQDNEQGQSLAFSSVIGEGQADILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQG 563
           E  +EQ       +        I+A+T+CP+GVAHTF+AA++LE  A   G +IKVET+G
Sbjct: 104 ELSSEQATRCDSPATASVSAKKIVAITACPTGVAHTFMAAEALEAEATRQGHQIKVETRG 163

Query: 564 ANGIINRITAKDVQRAKLVIFAHDVAIKEPERFKHIKVIDVTT 606
           + G  N++T +++  A LVI A D+ +   +RF   K+   +T
Sbjct: 164 SVGAKNQLTEQEIAAADLVIIAADIDV-PLDRFNGKKLYKTST 205



 Score = 38.5 bits (88), Expect = 8e-07
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)

Query: 526 ILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAKLVIFA 585
           I  VT+CPSGVA++ +AA  L++A+   G +  +E        + ++ +++ +A LVI A
Sbjct: 5   IAIVTACPSGVANSIIAAGLLQQASKTLGWEAYIECHSTVIAGHTLSEEEINKADLVILA 64

Query: 586 HDVAIKEPERFKHIKV 601
            +  I + +RF   KV
Sbjct: 65  ANGKI-DMQRFVGKKV 79