Pairwise Alignments

Query, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., PTS fructose transporter subunit IIC from Vibrio cholerae E7946 ATCC 55056

 Score =  242 bits (618), Expect = 3e-68
 Identities = 144/335 (42%), Positives = 195/335 (58%), Gaps = 16/335 (4%)

Query: 182 LLFGTSHMMPFIVAGGVLLSLSVMMSGHG-----AVPEEGVLADIAQMGIAGLTLFTVVL 236
           L+ G SHM+PF+V GG+L++L++ + G       A+P   +   I ++G+   TL   +L
Sbjct: 288 LMNGVSHMIPFVVTGGLLIALALAVGGEPTEAGMAIPAGSMWNQILEVGVVAFTLMIPIL 347

Query: 237 GGYIAYSMADKPGLAPGMIGTWIAIN------QYQTGFIGAIIVGFFAGFVVRQLKRIAL 290
            GYIAY++AD+P L+PG+IG WIA N         TGFIGAII G   G+ V+ +  I  
Sbjct: 348 AGYIAYAIADRPALSPGLIGGWIANNGSFYGADAGTGFIGAIIAGLLVGYFVKWITSINY 407

Query: 291 PDSMSSLGSIFIYPLVGTFVTCGAVMWLIGAPIASSMLWLNQFLASMADSGKVVLGAVLG 350
              +  L  I I P+  +    G  +++IGAPIAS M  L   L SM+    ++LG VLG
Sbjct: 408 HKFIQPLVPIMIAPITASLFIAGLFIFVIGAPIASLMDGLTALLTSMSSGNVILLGIVLG 467

Query: 351 AMTAFDMGGPINKVATLFAQTQV-NTQPWLMGGVGIAICTPPLGMALATLLSP--SKFKR 407
            M  FDMGGP NKVA LF+   + + Q   MG +  AI   PLGMALAT +      F+ 
Sbjct: 468 GMAGFDMGGPFNKVAFLFSVGMIASGQTQFMGAMACAIPVAPLGMALATAMGRKLELFES 527

Query: 408 DEREAGKAAGIMGMIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAPWGG 467
            E EAGKAAG MG++GISEGAIPFAA DP  V+PA + G +V  V+ F F + N    GG
Sbjct: 528 SELEAGKAAGAMGLVGISEGAIPFAAQDPMSVIPANVLGSMVAAVMAFSFGITNSVAHGG 587

Query: 468 WIV--LPVVDGKLGYILGTIAGALATALIAIALKK 500
            +V  L  ++  L  +L   AGA  TA+  + LKK
Sbjct: 588 PVVALLGAMNYPLLALLCMAAGAGVTAITCVTLKK 622



 Score =  180 bits (456), Expect = 2e-49
 Identities = 90/156 (57%), Positives = 116/156 (74%)

Query: 3   ITHLIEPEIICLDLKANNKEDVLIELVELLDNAGKLTDKQQFLNDIWRREEIGNTGFEEG 62
           I  LI  ++I LDL+AN+K+ V  EL+ +L   G+++DK  FL DI  REE+GNTGFE+G
Sbjct: 2   INQLINADLIQLDLQANSKQAVFEELINILHAQGRISDKAAFLKDIQAREELGNTGFEDG 61

Query: 63  IAIPHAKSAAVALPAVVVGISRQGIDYGAEDGQLSDVFFMLASPDGEDHHHIEVLAQISS 122
           +AIPHAKSAAV  PAV +G+SR+GIDYGAEDG  S +FFM+ASPDG D+HHIEVLA++SS
Sbjct: 62  VAIPHAKSAAVTQPAVAIGVSREGIDYGAEDGLPSKLFFMIASPDGGDNHHIEVLAELSS 121

Query: 123 KLIEEGFVEQLKAAESVEQALALFIHPQHSTLSSTQ 158
           KLIEEGF+E     ++ EQAL L +     T  + Q
Sbjct: 122 KLIEEGFIEAFLNTKNSEQALELLLKKSAPTPLANQ 157



 Score = 73.9 bits (180), Expect = 2e-17
 Identities = 38/97 (39%), Positives = 62/97 (63%), Gaps = 1/97 (1%)

Query: 521 EGQADILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAK 580
           E +  I+ VT CP+G+AHT+LAA++LEK A   G +IKVET G+ G+ N  +A++++RA+
Sbjct: 159 ESKGLIIGVTGCPAGIAHTYLAAEALEKGAAALGFEIKVETNGSIGVKNSPSAEEIERAE 218

Query: 581 LVIFAHDVAIKEPERFKHIKVIDVTTKDAILNAAALV 617
            ++ A D  + +  RF   ++I    K  I +A  L+
Sbjct: 219 AIVVACDKQV-DMARFAGKRLIKTNVKAPIRDAQKLI 254