Pairwise Alignments

Query, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., PTS system, inactive IIB catalytic domain / PTS system, fructose-specific IIB component (EC 2.7.1.202) / PTS system, fructose-specific IIC component from Sphingobium sp. HT1-2

 Score =  239 bits (609), Expect = 3e-67
 Identities = 142/334 (42%), Positives = 201/334 (60%), Gaps = 14/334 (4%)

Query: 180 EHLLFGTSHMMPFIVAGGVLLSLSVMMSGHGA--VPEEGVLA----DIAQMGIAGLTLFT 233
           +HL+ G S M+PF+VAGG+L++L+  + G  A     +G LA    +I   G  G  L  
Sbjct: 231 KHLMTGVSFMLPFVVAGGLLIALAFALGGIHANDAAAKGTLAYALFEIGAKG--GFVLMV 288

Query: 234 VVLGGYIAYSMADKPGLAPGMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQLKR-IALPD 292
             L GYIAYS+AD+PG+APGMIG  +A N    GF+G I+ GF AG+ V  L R I LP 
Sbjct: 289 PALAGYIAYSVADRPGIAPGMIGGMLAAN-LGAGFLGGIVAGFIAGYGVDWLNRLIQLPK 347

Query: 293 SMSSLGSIFIYPLVGTFVTCGAVMWLIGAPIASSMLWLNQFLASMADSGKVVLGAVLGAM 352
           ++  L  + I PL+GT +T   +++ +G P+A+++ +L  +L SM  S  ++LG +LGAM
Sbjct: 348 NLQGLKPVLILPLLGTLLTGLLMLYAVGTPVAAALAFLTDWLRSMQGSSALMLGLILGAM 407

Query: 353 TAFDMGGPINKVATLFAQTQVNTQPWL-MGGVGIAICTPPLGMALATLLSPSKFKRDERE 411
           +AFDMGGP+NK    F+   + +Q +  M     A  TPPL +ALAT L  ++F  +ERE
Sbjct: 408 SAFDMGGPVNKAGYAFSVGLIASQVYTPMAATMAAGMTPPLAVALATRLFRNRFTPEERE 467

Query: 412 AGKAAGIMGMIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAPWGGWIVL 471
           AG AA ++G+  I+EGAIPFAA DP RV+PA++AG  V   I     V    P GG  VL
Sbjct: 468 AGAAAAVLGLAFITEGAIPFAARDPLRVIPALMAGSAVTGAISMAMGVELKVPHGGLFVL 527

Query: 472 PV---VDGKLGYILGTIAGALATALIAIALKKTV 502
           P+   V     Y L   AG L +AL+   +K+ +
Sbjct: 528 PIPGAVTHVGVYALAIFAGTLVSALLVGLVKRPI 561



 Score = 72.8 bits (177), Expect = 4e-17
 Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 1/93 (1%)

Query: 526 ILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAKLVIFA 585
           I+A+TSCP+G+AHTF+AA+ L + A   G  I+VETQG+ G  N +TA+++  A +V+ A
Sbjct: 105 IVAITSCPTGIAHTFMAAEGLAEGARQLGYAIRVETQGSVGAGNALTAEEIAAADIVLIA 164

Query: 586 HDVAIKEPERFKHIKVIDVTTKDAILNAAALVQ 618
            D  + +  RF   +V    TK AI   A L++
Sbjct: 165 ADREV-DRSRFAGKRVFAGNTKPAITGGAKLIE 196



 Score = 28.9 bits (63), Expect = 6e-04
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 526 ILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIIN 569
           I AV           LA ++L KAA  +G  I++E + A GI+N
Sbjct: 4   IFAVVDAGEAGVAGVLAGEALRKAAKASGQAIEIELRTAQGIVN 47