Pairwise Alignments

Query, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

Subject, 580 a.a., fructose PTS permease - IIBC component from Pseudomonas putida KT2440

 Score =  233 bits (595), Expect = 1e-65
 Identities = 142/340 (41%), Positives = 203/340 (59%), Gaps = 9/340 (2%)

Query: 169 SPMAQRLARVKEHLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPEEGVL-ADIAQMG-I 226
           +P       V +HLL G S M+P +VAGG+L++LS +  G  A  E G L A + Q+G  
Sbjct: 230 TPTKSEKTGVYKHLLTGVSFMLPMVVAGGLLIALSFVF-GIEAYKEAGTLPAALMQIGGE 288

Query: 227 AGLTLFTVVLGGYIAYSMADKPGLAPGMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQLK 286
           A   L   +L GYIA+S+AD+PGLAPGMIG  +A +    GFIG I+ GF AG+  + + 
Sbjct: 289 AAFKLMVPLLAGYIAWSIADRPGLAPGMIGGLLA-STLGAGFIGGIVAGFLAGYSAKAIA 347

Query: 287 RIA-LPDSMSSLGSIFIYPLVGTFVTCGAVMWLIGAPIASSMLWLNQFLASMADSGKVVL 345
           R A LP S+ +L  I I PL+ +  T   +++++G P+A+ +  L  FL SM  +  ++L
Sbjct: 348 RWARLPSSLEALKPILIIPLLASLFTGLVMIYVVGQPVAAMLEGLTHFLDSMGTTNAILL 407

Query: 346 GAVLGAMTAFDMGGPINKVATLFAQTQVNTQPWL-MGGVGIAICTPPLGMALATLLSPSK 404
           G +LG M   D+GGPINK A  F+   + +  +  M     A   PP+G+ +AT L+  K
Sbjct: 408 GLLLGGMMCVDLGGPINKAAYAFSVGLLASSSYAPMAATMAAGMVPPIGLGIATFLARRK 467

Query: 405 FKRDEREAGKAAGIMGMIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAP 464
           F + EREAGKAA  +G+  ISEGAIPFAA DP RV+PA IAGG +   +   F     AP
Sbjct: 468 FAQSEREAGKAALALGLCFISEGAIPFAAKDPLRVIPASIAGGALTGALSMYFGCKLMAP 527

Query: 465 WGGWIVLPV---VDGKLGYILGTIAGALATALIAIALKKT 501
            GG  VL +   ++  L Y+L  +AG+L TA++   +KK+
Sbjct: 528 HGGLFVLLIPNAINHALLYLLAIVAGSLVTAVVYAVIKKS 567



 Score = 65.5 bits (158), Expect = 6e-15
 Identities = 31/67 (46%), Positives = 50/67 (74%)

Query: 524 ADILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAKLVI 583
           A I+AVT+CP+GVAHTF+AA++L++AA   G ++ VETQG+ G  N ++A+ +  A +V+
Sbjct: 118 ARIVAVTACPTGVAHTFMAAEALQQAAQQLGYQLTVETQGSVGARNPLSAEAIAAADVVL 177

Query: 584 FAHDVAI 590
            A D+ +
Sbjct: 178 LAADIEV 184



 Score = 32.0 bits (71), Expect = 8e-05
 Identities = 18/59 (30%), Positives = 29/59 (49%)

Query: 525 DILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAKLVI 583
           +I  VT+CP+G   + L+A+ L  AA   G    VE Q       +++A  +  A  V+
Sbjct: 2   NIAIVTACPNGQVSSVLSARLLSAAAQRRGWSTSVEVQNTEHPERQLSAAQIAEADWVL 60