Pairwise Alignments

Query, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., predicted enzyme IIC component of PTS (NCBI) from Escherichia coli BW25113

 Score =  293 bits (751), Expect = 6e-84
 Identities = 153/336 (45%), Positives = 210/336 (62%), Gaps = 5/336 (1%)

Query: 168 LSPMAQRLARVKEHLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPE---EGVLADIAQM 224
           ++ + Q L   ++HL+ G SHM+PF+V+GG+LL++SVM+ G GAVP+   +  L  +  +
Sbjct: 1   MNELVQILKNTRQHLMTGVSHMIPFVVSGGILLAVSVMLYGKGAVPDAVADPNLKKLFDI 60

Query: 225 GIAGLTLFTVVLGGYIAYSMADKPGLAPGMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQ 284
           G+AGLTL    L  YI YS+A++  LAP  IG W+  N +  GF GA+I G   G VV  
Sbjct: 61  GVAGLTLMVPFLAAYIGYSIAERSALAPCAIGAWVG-NSFGAGFFGALIAGIIGGIVVHY 119

Query: 285 LKRIALPDSMSSLGSIFIYPLVGTFVTCGAVMWLIGAPIASSMLWLNQFLASMADSGKVV 344
           LK+I +   + S+  IFI P+VGT +T G +MW +G P+ +    L Q+L  M     V+
Sbjct: 120 LKKIPVHKVLRSVMPIFIIPIVGTLITAGIMMWGLGEPVGALTNSLTQWLQGMQQGSIVM 179

Query: 345 LGAVLGAMTAFDMGGPINKVATLFAQTQVNTQPWLMGGVG-IAICTPPLGMALATLLSPS 403
           L  ++G M AFDMGGP+NKVA  F    V    + +  +  + IC PPLGM LATL+   
Sbjct: 180 LAVIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTVVAIAAVGICIPPLGMGLATLIGRK 239

Query: 404 KFKRDEREAGKAAGIMGMIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHA 463
            F  +ERE GKAA +MG +G++EGAIPFAAADP RV+P+I+ G + G V   L     +A
Sbjct: 240 NFSAEERETGKAALVMGCVGVTEGAIPFAAADPLRVIPSIMVGSVCGAVTAALVGAQCYA 299

Query: 464 PWGGWIVLPVVDGKLGYILGTIAGALATALIAIALK 499
            WGG IVLPVV+GKLGYI     GA+ TA+    LK
Sbjct: 300 GWGGLIVLPVVEGKLGYIAAVAVGAVVTAVCVNVLK 335