Pairwise Alignments

Query, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., predicted enzyme IIC component of PTS (NCBI) from Escherichia coli BW25113

 Score =  122 bits (305), Expect = 4e-32
 Identities = 100/369 (27%), Positives = 162/369 (43%), Gaps = 53/369 (14%)

Query: 180 EHLLFGTSHMMPFIVAGGVLLSLSVMMSGHGA-VPEEGVLADIAQMG-IAGLTL------ 231
           +H++ G S M+P ++ GGV+L+ S +++     +P E  + D    G  +G  L      
Sbjct: 37  QHVMSGISRMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFA 96

Query: 232 -----FTVVLGGY--------IAYSMADKPGLAPGMIG------------------TWIA 260
                F  VL G+        +A S+  K     G IG                   W  
Sbjct: 97  WLSQSFGGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWAT 156

Query: 261 INQYQTGFIGAIIVGFFAGFVVRQL-KRIALPDSMSSLGSIFIYPLVGTFVTCGAVMWLI 319
            +   + FIGA+I+   AG++V+ + ++I LPD + +  + F+ P++       A+ ++I
Sbjct: 157 SSPVPSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVI 216

Query: 320 GAPIASSMLWLN----QFLASMADSGKVVLGAVLGAMTAFDMGGPINKVATLFAQTQVNT 375
             P      W+N      L +  + G ++    + A TA D+GGPINK A   A +    
Sbjct: 217 -TPFGG---WINGGIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTD 272

Query: 376 QPWLMGGVGIAICTPPLGMALATLL-----SPSKFKRDEREAGKAAGIMGMIGISEGAIP 430
               +    IAI  PP+G+ LAT++         F       GK A  +  +GISEGAIP
Sbjct: 273 HVLPVTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIP 332

Query: 431 FAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAPWGGWIVLPVVDGKLGYILGTIAGALA 490
           FA   P   +P+ + G IVG+        +   P       P+V     Y+ G   GA+ 
Sbjct: 333 FALESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAVI 392

Query: 491 TALIAIALK 499
           TAL+ + L+
Sbjct: 393 TALMVVFLR 401