Pairwise Alignments

Query, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIA component/PTS system, fructose subfamily, IIC component from Enterobacter asburiae PDN3

 Score =  155 bits (392), Expect = 5e-42
 Identities = 104/326 (31%), Positives = 175/326 (53%), Gaps = 11/326 (3%)

Query: 178 VKEHLLFGTSHMMPFIVAGGVLLSLSVMMSG-----HGAVPEEGVLADIAQMGIAGLTLF 232
           +K+ LL G S  +P IVAGG +L++SV+++      H    E   L    ++G   L + 
Sbjct: 286 LKQALLSGISFAVPLIVAGGTVLAVSVLLAQILGLQHLFDQENSWLWMYRKLGGGMLGIL 345

Query: 233 TV-VLGGYIAYSMADKPGLAPGMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQLKR-IAL 290
            V VL  Y AYS+ADKP L PG     +A N   +GF+GAI+ G  AG+++R +K  I L
Sbjct: 346 MVPVLAAYTAYSLADKPALTPGF-AAGLAANMIGSGFLGAIVGGLIAGYLMRWVKNHIRL 404

Query: 291 PDSMSSLGSIFIYPLVGTFVTCGAVMWLIGAPIASSMLWLNQFLASMADSGKVVLGAVLG 350
               +   + ++YP++G       +++++G P+A     L  +L  ++ +  ++LGA+LG
Sbjct: 405 SSRFNGFLTFYLYPVIGVLGAGSLMLFVVGEPVAWLNTTLTAWLNGLSGANALLLGAILG 464

Query: 351 AMTAFDMGGPINKVATLFAQTQVNTQPWLMGGVGIAI-CTPPLGMALATLLSPSKFKRDE 409
            M +FD+GGP+NK +  F    +    +    +  ++       +  +TLL+P  FK  E
Sbjct: 465 FMCSFDLGGPVNKASYAFCLGAMANGVYGPYAIFASVKMVSAFTVTASTLLAPKLFKPFE 524

Query: 410 REAGKAAGIMGMIGISEGAIPFAAADPARVLPAIIAGGIV-GNVIGFLFQVLNHAPWGGW 468
            E GK+  ++G+ GI+EGAIP A  DP RV+ + + G +V G ++G +   L+    G +
Sbjct: 525 IETGKSTWLLGLAGITEGAIPMAIEDPLRVIGSFVLGSMVTGAIVGAMGIGLSTPGAGIF 584

Query: 469 IVLPVVDGKLGYILGTIAGALATALI 494
            +  + D  L  ++   AG    AL+
Sbjct: 585 SLFLLHDAGLSSVVAA-AGWFGAALV 609



 Score = 95.9 bits (237), Expect = 5e-24
 Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 7/157 (4%)

Query: 469 IVLPVVDGKLGYILGTIAGALATALIAIALKKTVHEQDNEQGQSLAFSSVIGEGQA---- 524
           ++L +   + G     +  AL + L   AL++ V   +  +    A + V  E +     
Sbjct: 102 VLLAIPPAEAGSTHIQVLTALTSRLADDALRERVMAAETAEDLLDALNGVSQEDEVATLV 161

Query: 525 ---DILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAKL 581
               ++ VT+CP+G+AHT++AA+ LEKA    GV + VE QGANGI  RITA+ +Q AK 
Sbjct: 162 NAPTVICVTACPAGIAHTYMAAEYLEKAGRKLGVNVVVEKQGANGIEGRITAQQLQEAKA 221

Query: 582 VIFAHDVAIKEPERFKHIKVIDVTTKDAILNAAALVQ 618
            IFA +VAIKE ERF+ I  I V   + + +A  L++
Sbjct: 222 CIFAAEVAIKENERFQGIPAISVPVAEPLRHAETLIE 258



 Score = 80.1 bits (196), Expect = 3e-19
 Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 2/145 (1%)

Query: 1   MDITHLIEPEIICLDLKANNKEDVLIELVELLDNAGKLTDKQQFLNDIWRREEIGNTGFE 60
           M++T L     +C+     ++++ + +L   L   GK+TD   FL +++RRE  G T   
Sbjct: 1   MNLTTLTHSSAVCVQAHYASRDEAIRQLTMRLVALGKITDGDAFLAEVYRRESQGPTALG 60

Query: 61  EGIAIPHAKSAAVALPAVVVGISRQGIDYGAEDG-QLSDVFFMLASPDGE-DHHHIEVLA 118
           EG+A+PH KS+AV   A  V    + +++   DG +  ++  +LA P  E    HI+VL 
Sbjct: 61  EGLAVPHGKSSAVNEAAFAVATLSEPLEWEGVDGPENVELIVLLAIPPAEAGSTHIQVLT 120

Query: 119 QISSKLIEEGFVEQLKAAESVEQAL 143
            ++S+L ++   E++ AAE+ E  L
Sbjct: 121 ALTSRLADDALRERVMAAETAEDLL 145