Pairwise Alignments

Query, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., PTS fructose-like transporter subunit IIBC from Escherichia coli ECRC101

 Score =  139 bits (350), Expect = 3e-37
 Identities = 97/304 (31%), Positives = 157/304 (51%), Gaps = 25/304 (8%)

Query: 178 VKEHLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPEEGVLAD-------IAQMGIAGLT 230
           V  HL+ G S  +PF++ GG+L++L+ M+   G +P   +          +  +G  G T
Sbjct: 128 VMSHLMAGVSAALPFVIGGGILVALANMLVQFG-LPYTDMSKGAPSFTWVVESIGYLGFT 186

Query: 231 LFTVVLGGYIAYSMADKPGLAPGMIGTWIAIN------QYQTGFIGAIIVGFFAGFVVRQ 284
               ++G YIA S+ADKP  AP  +  ++A +      Q   GF+GA+++G   G+ V  
Sbjct: 187 FMIPIMGAYIASSIADKPAFAPAFLVCYLANDKALLGTQSGAGFLGAVVLGLAIGYFVFW 246

Query: 285 LKRIALPDSMSSLGSIFIYPLVGTFVTCGAVMWLIGAPIASSMLW-LNQFLASMADSGKV 343
            +++ L  ++  L    + P V T +  G + + +  P+ S ++  L  FL ++  S K 
Sbjct: 247 FRKVRLGKALQPLLGSMLIPFV-TLLVFGVLTYYVIGPVMSDLMGGLLHFLNTIPPSMKF 305

Query: 344 VLGAVLGAMTAFDMGGPINKVATL--FAQTQVNTQPWLMGGVGIAICTPPLGMALATLLS 401
               ++GAM AFDMGGPINK A    F+  + +   W    VG+     P+   LAT ++
Sbjct: 306 AAAFLVGAMLAFDMGGPINKTAWFFCFSLLEKHIYDW-YAIVGVV----PVAAGLATFIA 360

Query: 402 PSKFKRDEREAGKAAGIMGMIGISEGAIPFAAADPARVLPA-IIAGGIVGNVIGFLFQVL 460
           P  F R E+EA  +A ++G    +E AIP+A A P  ++ A  +AGGI G V+   F + 
Sbjct: 361 PKLFTRQEKEAASSAIVVGATVATEPAIPYALAAPLPMITANTLAGGITG-VLVIAFGIK 419

Query: 461 NHAP 464
             AP
Sbjct: 420 RLAP 423



 Score = 68.9 bits (167), Expect = 5e-16
 Identities = 35/94 (37%), Positives = 60/94 (63%), Gaps = 2/94 (2%)

Query: 521 EGQADILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAK 580
           E    I+A+T+CP+G+AHT++ A++LE+ A   G  IKVETQG++G+ NR++++++  A 
Sbjct: 2   ESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQGSSGVENRLSSEEIAAAD 61

Query: 581 LVIFA--HDVAIKEPERFKHIKVIDVTTKDAILN 612
            VI A    ++  +  RF   KV ++    A+ N
Sbjct: 62  YVILATGRGLSGDDRARFAGKKVYEIAISQALKN 95