Pairwise Alignments

Query, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., PTS fructose transporter subunit IIBC from Dickeya dianthicola ME23

 Score =  241 bits (614), Expect = 8e-68
 Identities = 140/328 (42%), Positives = 198/328 (60%), Gaps = 11/328 (3%)

Query: 181 HLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPEEGVLADIAQMGIAGLTLFTV---VLG 237
           HLL G S+M+P +VAGG+ ++LS +  G  A  EEG LA  A M I G + F +   +L 
Sbjct: 229 HLLTGVSYMLPMVVAGGLCIALSFVF-GITAFKEEGTLA-AALMKIGGGSAFALMVPILA 286

Query: 238 GYIAYSMADKPGLAPGMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQLKR-IALPDSMSS 296
           GYIA+S+AD+PGL PG++G  +A++    GF+G II GF AG++ R +   + LP SMS+
Sbjct: 287 GYIAFSIADRPGLTPGLVGGMLAVST-GAGFLGGIIAGFLAGYLARAISNHVKLPQSMSA 345

Query: 297 LGSIFIYPLVGTFVTCGAVMWLIGAPIASSMLWLNQFLASMADSGKVVLGAVLGAMTAFD 356
           L  I I PL  T +T   +++++G P+A  +  L  +L SM  +  V+LGAVLG M   D
Sbjct: 346 LKPILIIPLFATLITGLIMIYVVGTPVAKILTGLTSWLQSMGTANAVILGAVLGGMMCTD 405

Query: 357 MGGPINKVATLFAQTQVNTQPWL-MGGVGIAICTPPLGMALATLLSPSKFKRDEREAGKA 415
           MGGP+NKVA +F  T +++Q +  M  V  A   PPL M LAT ++  KF   ERE GKA
Sbjct: 406 MGGPVNKVAYVFGTTLLSSQVYAPMAAVMAAGMVPPLAMGLATFIAGKKFTDSEREGGKA 465

Query: 416 AGIMGMIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAPWGGWIVLPV-- 473
           A ++G+  ISEGAIP+AA DP RVLP+ I GG +   +         AP GG  VL +  
Sbjct: 466 AVVLGLCFISEGAIPYAARDPMRVLPSCILGGALTGALSMAVGAKLMAPHGGLFVLLIPG 525

Query: 474 -VDGKLGYILGTIAGALATALIAIALKK 500
            +   LGY+   +AG +   ++   LK+
Sbjct: 526 AITPVLGYLFSIVAGTVVAGVLYAVLKR 553



 Score = 68.2 bits (165), Expect = 9e-16
 Identities = 39/102 (38%), Positives = 63/102 (61%), Gaps = 5/102 (4%)

Query: 494 IAIALKKTVHEQDNEQGQSLAFSSVIGEGQAD-----ILAVTSCPSGVAHTFLAAKSLEK 548
           I +AL + V   +  + Q+L + +      A      I+AVT+CP+GVAHTF+AA+++E 
Sbjct: 67  IELALSQPVAFLEKAKAQALPYQAPAAAAAAPAAAKRIVAVTACPTGVAHTFMAAEAIES 126

Query: 549 AACLAGVKIKVETQGANGIINRITAKDVQRAKLVIFAHDVAI 590
            A   G  +KVET+G+ G  N I+ ++V++A LVI A D+ +
Sbjct: 127 EAKKRGWWVKVETRGSVGAGNPISPEEVEQADLVIVAADIEV 168