Pairwise Alignments

Query, 467 a.a., PTS fructose transporter subunit IIC from Vibrio cholerae E7946 ATCC 55056

Subject, 569 a.a., FruA from Pseudomonas simiae WCS417

 Score =  224 bits (572), Expect = 4e-63
 Identities = 132/338 (39%), Positives = 193/338 (57%), Gaps = 6/338 (1%)

Query: 16  KKLLSTMKGHLLFGTSHMLPFIVAGGVLLALAVMASGKGAVPADGLLADISNIGIKGLVL 75
           KK  + +  HLL G S MLP +VAGG+L+AL+ M           L A +  +G +  +L
Sbjct: 225 KKEKTGVYKHLLTGVSFMLPMVVAGGLLIALSFMFGITAFEEKGTLAAALKTVGDQAFML 284

Query: 76  FPIILGGFIGYSIADKPALAPAMISSGIMADMGGGFLGCIVAGFIAGGVVFQLKK-IPLS 134
              +L G+I YSIAD+PALAP MI   +   +G GF+G I AGF+AG  V  + + + L 
Sbjct: 285 MVPLLAGYIAYSIADRPALAPGMIGGLLATTLGAGFIGGIFAGFLAGYCVKLITRAVQLP 344

Query: 135 ANMTALGAYFIYPLIGTLISAGIVLWGIGEPIKLFMASMNEFLASMAGASKVVLGAILGG 194
            ++ AL    I PL+ +L +   +++ +G P+   +  + EFL +M   + V+LG +LGG
Sbjct: 345 QSLDALKPILIIPLLASLFTGLAMIYLVGPPVARMLVGLTEFLNTMGTTNAVLLGILLGG 404

Query: 195 MTAFDMGGPINKVATLFAQTQVDTQPWL-MGGVGIAICTPPLGMALATFLFKKKFTKQEQ 253
           M   D+GGPINK A  F+   +       +     A   PP+GM +ATFL ++KF + E+
Sbjct: 405 MMCVDLGGPINKAAYAFSVGMLAAHSGAPIAATMAAGMVPPIGMGIATFLARRKFAQTER 464

Query: 254 EAGKAAAIMGSIGISEGAIPFAANDPMRVLPSIVAGGIVGCVFGFLTNVLLHAPWGG--- 310
           EAGKAA I+G + ISEGAIPFAA DP+RV+P+ +AGG +           L AP GG   
Sbjct: 465 EAGKAAIILGMVFISEGAIPFAAKDPLRVIPASIAGGALAGALSMYFGCKLAAPHGGLAV 524

Query: 311 LITAPVSSNIPMYVVGIALGSLTTALIVGFWK-PVAEE 347
           L+     ++  +Y++ I  GSL T L+    K P A+E
Sbjct: 525 LVIPNAMNHALLYLLAIVAGSLLTGLVYALIKRPEAQE 562



 Score = 80.9 bits (198), Expect = 1e-19
 Identities = 46/114 (40%), Positives = 66/114 (57%), Gaps = 4/114 (3%)

Query: 351 DEIAEAAPTQAQ---AAPAAGEGEYDIVAVTCCPSGVAHTFMAAKALEKAGAAAGSKIKV 407
           D +      +AQ   A   A E    IVA+T CP+GVAHTFMAA+AL++     G  ++V
Sbjct: 90  DAVLRRGAEEAQVYVATQQAAENAPRIVAITACPTGVAHTFMAAEALQQTAKRLGYDLQV 149

Query: 408 ETQGQNGIKNRITDLDVANAKLVILAHDIQVKDAHRFANAKVIECSTKEAMKKA 461
           ETQG  G +  ++   +A A +V+LA DI+V    RFA  K+  C T  A+K++
Sbjct: 150 ETQGSVGARTPLSPQAIAEADVVLLAADIEVA-TERFAGKKIYRCGTGIALKQS 202



 Score = 36.2 bits (82), Expect = 3e-06
 Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 1/85 (1%)

Query: 374 IVAVTCCPSGVAHTFMAAKALEKAGAAAGSKIKVETQGQNGIKNRITDLDVANAKLVILA 433
           +  VT CP+G+  + + A+ L+ A    G    VE       + +++   + +A+ V+L 
Sbjct: 3   LAIVTACPNGMVTSVLCARLLDAAAQRQGWSTSVEVVDVQRPERQLSQATIDDAEWVLLV 62

Query: 434 HDIQVKDAHRFANAKVIECSTKEAM 458
               V D  RF   +V + +  +A+
Sbjct: 63  SSTPV-DMQRFVGKRVFQSTPAQAL 86