Pairwise Alignments

Query, 467 a.a., PTS fructose transporter subunit IIC from Vibrio cholerae E7946 ATCC 55056

Subject, 580 a.a., PTS fructose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

 Score =  223 bits (567), Expect = 2e-62
 Identities = 136/351 (38%), Positives = 193/351 (54%), Gaps = 9/351 (2%)

Query: 2   STLTAQATNNSSNFKKLLSTMKGHLLFGTSHMLPFIVAGGVLLALAVMASGKGAVPADGL 61
           S+    ATN  +  KK    +  HL+ G SHMLP +VAGG+++AL+ +   +       L
Sbjct: 227 SSSANSATNEKAEEKK---GVYKHLMTGVSHMLPVVVAGGLIIALSFVFGIEAFKEEGTL 283

Query: 62  LADISNIGI-KGLVLFPIILGGFIGYSIADKPALAPAMISSGIMADMGGGFLGCIVAGFI 120
            A +  IG      L   +L G+I +SIAD+P LAP +I   + +  G GFLG IVAGF+
Sbjct: 284 AAALMQIGGGSAFALMIPVLAGYIAFSIADRPGLAPGLIGGMLASSTGAGFLGGIVAGFL 343

Query: 121 AG-GVVFQLKKIPLSANMTALGAYFIYPLIGTLISAGIVLWGIGEPIKLFMASMNEFLAS 179
           AG    F   K+ L  +M AL    I P I +L +  ++++ +G P+   M+ M  FL +
Sbjct: 344 AGYSAKFIADKVQLPQSMAALKPILIIPFIASLFTGLVMIYVVGGPMSSIMSGMTSFLNN 403

Query: 180 MAGASKVVLGAILGGMTAFDMGGPINKVATLFAQTQVDTQPWL-MGGVGIAICTPPLGMA 238
           M   + ++LG +LG M  FD+GGP+NK A  F    + +Q +  M  +  A   P LGM 
Sbjct: 404 MGSTNAILLGIVLGAMMCFDLGGPVNKAAYTFGVGLLASQTYAPMAAIMAAGMVPALGMG 463

Query: 239 LATFLFKKKFTKQEQEAGKAAAIMGSIGISEGAIPFAANDPMRVLPSIVAGGIVGCVFGF 298
           LATF+ K KF   E+EAGKA+ ++G   ISEGAIPFAA DPMRV+P+ + GG V      
Sbjct: 464 LATFIAKDKFEAGEREAGKASFVLGLCFISEGAIPFAAKDPMRVIPACMVGGAVTGALSM 523

Query: 299 LTNVLLHAPWGGLITAPVS---SNIPMYVVGIALGSLTTALIVGFWKPVAE 346
           L    L AP GGL    +    S + +Y+V IA+G+  T       K  A+
Sbjct: 524 LFGAKLMAPHGGLFVLLIPNAISPVLLYLVAIAVGTAITGFGYAMLKKSAQ 574



 Score = 93.2 bits (230), Expect = 2e-23
 Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 3/126 (2%)

Query: 338 VGFWKPVAEEEVEDEIAEAAPTQAQAAPAAGEGEYDIVAVTCCPSGVAHTFMAAKALEKA 397
           VG+ K  AE+  E  ++    T+  +   A      IVA+T CP+GVAHTFMAA+ALE  
Sbjct: 92  VGYLKQAAEQATE--LSSEQATRCDSPATASVSAKKIVAITACPTGVAHTFMAAEALEAE 149

Query: 398 GAAAGSKIKVETQGQNGIKNRITDLDVANAKLVILAHDIQVKDAHRFANAKVIECSTKEA 457
               G +IKVET+G  G KN++T+ ++A A LVI+A DI V    RF   K+ + ST   
Sbjct: 150 ATRQGHQIKVETRGSVGAKNQLTEQEIAAADLVIIAADIDV-PLDRFNGKKLYKTSTGLT 208

Query: 458 MKKAAE 463
           +KK A+
Sbjct: 209 LKKTAQ 214



 Score = 44.3 bits (103), Expect = 1e-08
 Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 12/102 (11%)

Query: 374 IVAVTCCPSGVAHTFMAAKALEKAGAAAGSKIKVETQGQNGIKNRITDLDVANAKLVILA 433
           I  VT CPSGVA++ +AA  L++A    G +  +E        + +++ ++  A LVILA
Sbjct: 5   IAIVTACPSGVANSIIAAGLLQQASKTLGWEAYIECHSTVIAGHTLSEEEINKADLVILA 64

Query: 434 HDIQVKDAHRFANAKVIE-----CST------KEAMKKAAEL 464
            + ++ D  RF   KV +     C++      K+A ++A EL
Sbjct: 65  ANGKI-DMQRFVGKKVYQSPITACTSDPVGYLKQAAEQATEL 105