Pairwise Alignments

Query, 467 a.a., PTS fructose transporter subunit IIC from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., PTS fructose transporter subunit IIC from Vibrio cholerae E7946 ATCC 55056

 Score =  221 bits (563), Expect = 6e-62
 Identities = 140/365 (38%), Positives = 201/365 (55%), Gaps = 19/365 (5%)

Query: 3   TLTAQATNNSSNFKKLLSTMKGHLLFGTSHMLPFIVAGGVLLALAVMASGKG-----AVP 57
           T+ AQ+  N ++  +  S +   L+ G SHM+PF+V GG+L+ALA+   G+      A+P
Sbjct: 267 TVKAQSVANKASQAR--SDLYRFLMNGVSHMIPFVVTGGLLIALALAVGGEPTEAGMAIP 324

Query: 58  ADGLLADISNIGIKGLVLFPIILGGFIGYSIADKPALAPAMISSGIM-------ADMGGG 110
           A  +   I  +G+    L   IL G+I Y+IAD+PAL+P +I   I        AD G G
Sbjct: 325 AGSMWNQILEVGVVAFTLMIPILAGYIAYAIADRPALSPGLIGGWIANNGSFYGADAGTG 384

Query: 111 FLGCIVAGFIAGGVVFQLKKIPLSANMTALGAYFIYPLIGTLISAGIVLWGIGEPIKLFM 170
           F+G I+AG + G  V  +  I     +  L    I P+  +L  AG+ ++ IG PI   M
Sbjct: 385 FIGAIIAGLLVGYFVKWITSINYHKFIQPLVPIMIAPITASLFIAGLFIFVIGAPIASLM 444

Query: 171 ASMNEFLASMAGASKVVLGAILGGMTAFDMGGPINKVATLFAQTQVDT-QPWLMGGVGIA 229
             +   L SM+  + ++LG +LGGM  FDMGGP NKVA LF+   + + Q   MG +  A
Sbjct: 445 DGLTALLTSMSSGNVILLGIVLGGMAGFDMGGPFNKVAFLFSVGMIASGQTQFMGAMACA 504

Query: 230 ICTPPLGMALATFLFKK--KFTKQEQEAGKAAAIMGSIGISEGAIPFAANDPMRVLPSIV 287
           I   PLGMALAT + +K   F   E EAGKAA  MG +GISEGAIPFAA DPM V+P+ V
Sbjct: 505 IPVAPLGMALATAMGRKLELFESSELEAGKAAGAMGLVGISEGAIPFAAQDPMSVIPANV 564

Query: 288 AGGIVGCVFGFLTNVLLHAPWGGLITAPVSS-NIPMY-VVGIALGSLTTALIVGFWKPVA 345
            G +V  V  F   +      GG + A + + N P+  ++ +A G+  TA+     K + 
Sbjct: 565 LGSMVAAVMAFSFGITNSVAHGGPVVALLGAMNYPLLALLCMAAGAGVTAITCVTLKKIR 624

Query: 346 EEEVE 350
            ++ E
Sbjct: 625 SQKFE 629



 Score = 84.0 bits (206), Expect = 1e-20
 Identities = 49/123 (39%), Positives = 78/123 (63%), Gaps = 8/123 (6%)

Query: 345 AEEEVEDEIAEAAPTQAQAAPAAGEGEYD--IVAVTCCPSGVAHTFMAAKALEKAGAAAG 402
           +E+ +E  + ++APT     P A + E    I+ VT CP+G+AHT++AA+ALEK  AA G
Sbjct: 138 SEQALELLLKKSAPT-----PLANQAESKGLIIGVTGCPAGIAHTYLAAEALEKGAAALG 192

Query: 403 SKIKVETQGQNGIKNRITDLDVANAKLVILAHDIQVKDAHRFANAKVIECSTKEAMKKAA 462
            +IKVET G  G+KN  +  ++  A+ +++A D QV D  RFA  ++I+ + K  ++ A 
Sbjct: 193 FEIKVETNGSIGVKNSPSAEEIERAEAIVVACDKQV-DMARFAGKRLIKTNVKAPIRDAQ 251

Query: 463 ELI 465
           +LI
Sbjct: 252 KLI 254