Pairwise Alignments

Query, 467 a.a., PTS fructose transporter subunit IIC from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., predicted enzyme IIC component of PTS (NCBI) from Escherichia coli BW25113

 Score =  118 bits (296), Expect = 3e-31
 Identities = 102/389 (26%), Positives = 171/389 (43%), Gaps = 54/389 (13%)

Query: 2   STLTAQATNNSSNFKKLLSTMKGHLLFGTSHMLPFIVAGGVLLALA-VMASGKGAVPADG 60
           S   A   N  ++       +  H++ G S M+P ++ GGV+LA + ++A     +PA+ 
Sbjct: 15  SGAAAAVKNPQASKTSFWGELPQHVMSGISRMVPTLIMGGVILAFSQLIAYSWLKIPAEI 74

Query: 61  LLADISNIG--------------------------------------IKGLVLFPIILGG 82
            + D  N G                                      I G + FP    G
Sbjct: 75  GIMDALNSGKFSGFDLSLLKFAWLSQSFGGVLFGFAIPMFAAFVANSIGGKLAFP---AG 131

Query: 83  FIGYSIADKPA----LAPAMISSGIMADMGGGFLGCIVAGFIAGGVV-FQLKKIPLSANM 137
           FIG  ++ +P       P+ +     + +   F+G ++   +AG +V +  +KI L   +
Sbjct: 132 FIGGLMSTQPTQLLNFDPSTMQWATSSPVPSTFIGALIISIVAGYLVKWMNQKIQLPDFL 191

Query: 138 TALGAYFIYPLIGTLISAGIVLWGIGEPIKLFMASMNEFLASMAGASKVVLGAI-LGGMT 196
            A    F+ P++ + I   + ++ +  P   ++      + + AG    ++ A+ +   T
Sbjct: 192 LAFKTTFLLPIL-SAIFVMLAMYYVITPFGGWINGGIRTVLTAAGEKGALMYAMGIAAAT 250

Query: 197 AFDMGGPINKVATLFAQTQVDTQPWLMGGVGIAICTPPLGMALATFL-----FKKKFTKQ 251
           A D+GGPINK A   A +        +    IAI  PP+G+ LAT +      K+ F  Q
Sbjct: 251 AIDLGGPINKAAGFVAFSFTTDHVLPVTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQ 310

Query: 252 EQEAGKAAAIMGSIGISEGAIPFAANDPMRVLPSIVAGGIVGCVFGFLTNVLLHAPWGGL 311
               GK A  +  +GISEGAIPFA   P+  +PS + G IVG         +   P   +
Sbjct: 311 LYPQGKTAMFLAFMGISEGAIPFALESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAI 370

Query: 312 ITAPVSSNIPMYVVGIALGSLTTALIVGF 340
              P+ +N+ +Y+ GIALG++ TAL+V F
Sbjct: 371 WAWPLVTNLGVYMAGIALGAVITALMVVF 399