Pairwise Alignments

Query, 467 a.a., PTS fructose transporter subunit IIC from Vibrio cholerae E7946 ATCC 55056

Subject, 658 a.a., fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component (NCBI) from Escherichia coli BW25113

 Score =  164 bits (415), Expect = 8e-45
 Identities = 109/326 (33%), Positives = 179/326 (54%), Gaps = 26/326 (7%)

Query: 5   TAQATNNSSNFKKLLSTMKGHLLFGTSHMLPFIVAGGVLLALAVMASGKGAVPADGLLAD 64
           T     ++   K + + +K  LL G S  +P IVAGG +LA+AV+ S          L D
Sbjct: 289 TRTVQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLLSQIFG------LQD 342

Query: 65  ISNI-------------GIKGLVLFPIILGGFIGYSIADKPALAPAMISSGIMADM-GGG 110
           + N              G+ G+++ P+ L  +  YS+ADKPALAP   ++G+ A+M G G
Sbjct: 343 LFNEENSWLWMYRKLGGGLLGILMVPV-LAAYTAYSLADKPALAPGF-AAGLAANMIGSG 400

Query: 111 FLGCIVAGFIAGGVVFQLKK-IPLSANMTALGAYFIYPLIGTLISAGIVLWGIGEPIKLF 169
           FLG +V G IAG ++  +K  + LS+       +++YP++GTL +  ++L+ +GEP+   
Sbjct: 401 FLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLMLFVVGEPVAWI 460

Query: 170 MASMNEFLASMAGASKVVLGAILGGMTAFDMGGPINKVATLFAQTQVDTQPWLMGGVGIA 229
             S+  +L  ++G++ ++LGAILG M +FD+GGP+NK A  F    +    +    +  +
Sbjct: 461 NNSLTAWLNGLSGSNALLLGAILGFMCSFDLGGPVNKAAYAFCLGAMANGVYGPYAIFAS 520

Query: 230 I-CTPPLGMALATFLFKKKFTKQEQEAGKAAAIMGSIGISEGAIPFAANDPMRVLPSIVA 288
           +       +  +T L  + F + E E GK+  ++G  GI+EGAIP A  DP+RV+ S V 
Sbjct: 521 VKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPMAIEDPLRVIGSFVL 580

Query: 289 GGIV-GCVFGFLTNVLLHAPWGGLIT 313
           G +V G + G + N+ L  P  G+ +
Sbjct: 581 GSMVTGAIVGAM-NIGLSTPGAGIFS 605



 Score = 80.5 bits (197), Expect = 2e-19
 Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 1/117 (0%)

Query: 351 DEIAEAAPTQAQAAPAAG-EGEYDIVAVTCCPSGVAHTFMAAKALEKAGAAAGSKIKVET 409
           DE+  A   +    P+A       IV VT CP+G+AHT+MAA+ LEKAG   G  + VE 
Sbjct: 162 DELLSALDDKGGTQPSASFSNAPTIVCVTACPAGIAHTYMAAEYLEKAGRKLGVNVYVEK 221

Query: 410 QGQNGIKNRITDLDVANAKLVILAHDIQVKDAHRFANAKVIECSTKEAMKKAAELIQ 466
           QG NGI+ R+T   + +A   I A ++ +K++ RF     +     E ++ A  LIQ
Sbjct: 222 QGANGIEGRLTADQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEALIQ 278