Pairwise Alignments

Query, 467 a.a., PTS fructose transporter subunit IIC from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIA component/PTS system, fructose subfamily, IIC component from Enterobacter asburiae PDN3

 Score =  160 bits (405), Expect = 1e-43
 Identities = 114/347 (32%), Positives = 186/347 (53%), Gaps = 21/347 (6%)

Query: 6   AQATNNSSNFKKLLST-MKGHLLFGTSHMLPFIVAGGVLLALAVMASGKGAVPADGLLAD 64
           A+  +  +  KK + T +K  LL G S  +P IVAGG +LA++V+ +    +     L D
Sbjct: 269 ARHAHGDTEMKKSVKTELKQALLSGISFAVPLIVAGGTVLAVSVLLA---QILGLQHLFD 325

Query: 65  ISNI----------GIKGLVLFPIILGGFIGYSIADKPALAPAMISSGIMADM-GGGFLG 113
             N           G+ G+++ P+ L  +  YS+ADKPAL P   ++G+ A+M G GFLG
Sbjct: 326 QENSWLWMYRKLGGGMLGILMVPV-LAAYTAYSLADKPALTPGF-AAGLAANMIGSGFLG 383

Query: 114 CIVAGFIAGGVVFQLKK-IPLSANMTALGAYFIYPLIGTLISAGIVLWGIGEPIKLFMAS 172
            IV G IAG ++  +K  I LS+       +++YP+IG L +  ++L+ +GEP+     +
Sbjct: 384 AIVGGLIAGYLMRWVKNHIRLSSRFNGFLTFYLYPVIGVLGAGSLMLFVVGEPVAWLNTT 443

Query: 173 MNEFLASMAGASKVVLGAILGGMTAFDMGGPINKVATLFAQTQVDTQPWLMGGVGIAI-C 231
           +  +L  ++GA+ ++LGAILG M +FD+GGP+NK +  F    +    +    +  ++  
Sbjct: 444 LTAWLNGLSGANALLLGAILGFMCSFDLGGPVNKASYAFCLGAMANGVYGPYAIFASVKM 503

Query: 232 TPPLGMALATFLFKKKFTKQEQEAGKAAAIMGSIGISEGAIPFAANDPMRVLPSIVAGGI 291
                +  +T L  K F   E E GK+  ++G  GI+EGAIP A  DP+RV+ S V G +
Sbjct: 504 VSAFTVTASTLLAPKLFKPFEIETGKSTWLLGLAGITEGAIPMAIEDPLRVIGSFVLGSM 563

Query: 292 V-GCVFGFLTNVLLHAPWGGLITAPVSSNIPMYVVGIALGSLTTALI 337
           V G + G +  + L  P  G+ +  +  +  +  V  A G    AL+
Sbjct: 564 VTGAIVGAM-GIGLSTPGAGIFSLFLLHDAGLSSVVAAAGWFGAALV 609



 Score = 80.5 bits (197), Expect = 2e-19
 Identities = 39/93 (41%), Positives = 55/93 (59%)

Query: 374 IVAVTCCPSGVAHTFMAAKALEKAGAAAGSKIKVETQGQNGIKNRITDLDVANAKLVILA 433
           ++ VT CP+G+AHT+MAA+ LEKAG   G  + VE QG NGI+ RIT   +  AK  I A
Sbjct: 166 VICVTACPAGIAHTYMAAEYLEKAGRKLGVNVVVEKQGANGIEGRITAQQLQEAKACIFA 225

Query: 434 HDIQVKDAHRFANAKVIECSTKEAMKKAAELIQ 466
            ++ +K+  RF     I     E ++ A  LI+
Sbjct: 226 AEVAIKENERFQGIPAISVPVAEPLRHAETLIE 258