Pairwise Alignments

Query, 467 a.a., PTS fructose transporter subunit IIC from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., PTS fructose transporter subunit IIBC from Escherichia coli ECRC98

 Score =  214 bits (546), Expect = 5e-60
 Identities = 141/362 (38%), Positives = 195/362 (53%), Gaps = 19/362 (5%)

Query: 3   TLTAQATNNSSNFKKLLSTMKGHLLFGTSHMLPFIVAGGVLLALAVMASGKGAVPADGLL 62
           T T++  N S+   +       HLL G S+MLP +VAGG+ +AL+  A G  A    G L
Sbjct: 214 TATSEGKNESAGAYR-------HLLTGVSYMLPMVVAGGLCIALS-FAFGIEAFKEPGTL 265

Query: 63  AD--ISNIGIKGLVLFPIILGGFIGYSIADKPALAPAMISSGIMADMGGGFLGCIVAGFI 120
           A   +   G     L   +L G+I +SIAD+P L P +I   +    G GF+G I+AGF+
Sbjct: 266 AAALMQIGGGSAFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFL 325

Query: 121 AGGVVFQLK-KIPLSANMTALGAYFIYPLIGTLISAGIVLWGIGEPIKLFMASMNEFLAS 179
           AG +   +  ++ L  +M AL    I PLI +L+    +++ IG+P+   +  +  +L +
Sbjct: 326 AGYIAKLISTQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQT 385

Query: 180 MAGASKVVLGAILGGMTAFDMGGPINKVATLFAQTQVDTQPW-LMGGVGIAICTPPLGMA 238
           M  A+ V+LGAILGGM   DMGGP+NK A  F    + TQ +  M  +  A   PPL M 
Sbjct: 386 MGTANAVLLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMG 445

Query: 239 LATFLFKKKFTKQEQEAGKAAAIMGSIGISEGAIPFAANDPMRVLPSIVAGGIVGCVFGF 298
           LAT + ++KF K +QE GKAA ++G   ISEGAIPFAA DPMRVLP  + GG +      
Sbjct: 446 LATMVARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISM 505

Query: 299 LTNVLLHAPWGGLITAPVSSNIPM---YVVGIALGSLTTALIVGFWKPVAEEEVEDEIAE 355
                L AP GGL    +   I     Y+V I  G+L   L   F K     EV D +A+
Sbjct: 506 AIGAKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLK---RPEV-DAVAK 561

Query: 356 AA 357
           AA
Sbjct: 562 AA 563



 Score = 87.8 bits (216), Expect = 8e-22
 Identities = 51/103 (49%), Positives = 64/103 (62%), Gaps = 1/103 (0%)

Query: 361 AQAAPAAGEGEYDIVAVTCCPSGVAHTFMAAKALEKAGAAAGSKIKVETQGQNGIKNRIT 420
           A  AP A  G   +VAVT CP+GVAHTFMAA+A+E      G  +KVET+G  G  N IT
Sbjct: 93  AATAPVAASGPKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAIT 152

Query: 421 DLDVANAKLVILAHDIQVKDAHRFANAKVIECSTKEAMKKAAE 463
             +VA A LVI+A DI+V D  +FA   +   ST  A+KK A+
Sbjct: 153 PEEVAAADLVIVAADIEV-DLAKFAGKPMYRTSTGLALKKTAQ 194