Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., sigma-54 dependent transcriptional regulator from Rhodanobacter sp000427505 FW510-R12

 Score =  195 bits (495), Expect = 4e-54
 Identities = 122/343 (35%), Positives = 186/343 (54%), Gaps = 16/343 (4%)

Query: 244 SVEQVLPRPQTHASFIYTTTPLHSKQHRTRALTPASDLHFGDAEVERCWQQANRVIDKDI 303
           +VE +L   ++      +      ++ + R+      L F    + R    A +V   D+
Sbjct: 118 TVENLLELSESTRELSRSRRERRQRREQLRSKYDLDGLVFASEAMGRTLNLACQVARSDV 177

Query: 304 RLLILGQTGVGKNEFVKALHKNSQRKNGPLVAVNCGALAKELVEAELFGYVAGAFTGASH 363
            +LI G  G GK      +H NS  K GP VAVNCGAL  EL+EAELFG  AGA+TGA+ 
Sbjct: 178 PVLITGPNGTGKERIAAIVHANSAVKRGPFVAVNCGALPGELIEAELFGAEAGAYTGAN- 236

Query: 364 KGYQGKVRLADKGILFLDEIADLPLDAQSRLLHVLQDKTVLPVGSNHATKVDIQIIAATH 423
           K  +G+  LAD G LFLDEI +LPL  Q +LL VL+      +GS    +  +++++AT+
Sbjct: 237 KAREGRFELADGGTLFLDEIGNLPLPGQMKLLRVLETGQFERLGSGKTRQAKVRVLSATN 296

Query: 424 KNLEQLVTQGLFRQDLYYRLSDLVVELPSFQQRQDRQALIHHIHRRYSDAGQQICGDLMQ 483
            +L+ ++  G FR+DLYYRL+ + V LP   +R D    I  +   + D   ++     +
Sbjct: 297 ADLKAMIQAGTFREDLYYRLNVIEVNLPPLSERNDD---ILPLAEFFLDGRAELGDAARE 353

Query: 484 RLLAYHWPGNLRELDSLIKVASLMAEGEGVLT-FNHLPTHLAQKLSHAAPTATEDDQQKD 542
            LLAY WPGN+REL + I+ A+L+A G+ +     +LP H A       P A   D+   
Sbjct: 354 ALLAYPWPGNVRELKNAIERAALLAGGQSITAELLNLPQHAA-----TVPAARNLDEPS- 407

Query: 543 IKSTVEASLLKTYQATQGNISQTSRLLGLSRNTIYRKLKALGI 585
            +  VE++L K      G +S+ ++ LGLSR  +YR+++  G+
Sbjct: 408 -REAVESALHK----ADGVVSRAAQNLGLSRQALYRRMERYGL 445