Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Acetoin catabolism regulatory protein from Xanthobacter sp. DMC5

 Score =  301 bits (772), Expect = 4e-86
 Identities = 201/608 (33%), Positives = 308/608 (50%), Gaps = 38/608 (6%)

Query: 13  LVNSWQRSEQAGLTQQSRAQDIRLSDNKLKERRQELAGLIDTVSRFALPLFYQLFAHSDS 72
           ++ SW R  + GL    R +   L+  +L  RR+    L     R  L   +   + +  
Sbjct: 39  IIRSWTRCAERGLPVGGRLKAEPLTQGELSIRRERYEALRRRC-RPELEALHLSASAAGG 97

Query: 73  RLILTDQHGVIIGSWGQARFREKLSQIALSSGACWQEPIKGTNAIGTALIEQKPISVIGE 132
            +ILTD  G+++ + G A F ++ +Q+AL  G  W E   GTNAIGTALIE++ I V G 
Sbjct: 98  IVILTDPTGLVLDTVGSADFADRAAQVALRPGVSWSEADSGTNAIGTALIERRGIEVRGA 157

Query: 133 QHFIQHHHFISCSASPIFDYTGQLIGVLDITSEQQKHTLSTQVVVQNMVQLVENQLLNQI 192
           +H+ + H  ++C+A+PI D  G+L+G+LD++            +V+  V  VE++L    
Sbjct: 158 EHYAEPHGILTCAAAPIHDPFGELVGLLDLSGPAAVPHHHALALVELAVGQVEHRLFEGA 217

Query: 193 PHGHVRIDLACEPSLLSSGWQGVIIADESGQILAHNQVAGQLLAQG------RVIGQSVE 246
             G   +    +PS L +  +GV++ ++  +++A N+ A  LL  G      R   +  E
Sbjct: 218 FPGRDVVRFHADPSFLGTAREGVLVFEDH-RLVAANRPALSLLGLGWDALGARRFSELFE 276

Query: 247 QVLPRPQTHASFIYTTTPLHSKQHRTR--------------ALTPASDLHFGDAEVERCW 292
             L RP           P+  +  R                A  PA      D+E E+  
Sbjct: 277 GSLGRPGDARRARTPNGPVMLRLERQAPAPVRMAAVPAVAPAPAPAPAGPSFDSETEQAL 336

Query: 293 QQANRVIDKDIRLLILGQTGVGKNEFVKALHKNSQRKNGPLVAVNCGALAKELVEAELFG 352
            +A R+++  + +LI G+TG GK  F + +H    R +    AVNC AL + L+E+ELFG
Sbjct: 337 GRAIRLMNAGVPVLIQGETGSGKEVFARQIHARGPRADRTFAAVNCAALPEGLIESELFG 396

Query: 353 YVAGAFTGASHKGYQGKVRLADKGILFLDEIADLPLDAQSRLLHVLQDKTVLPVGSNHAT 412
           Y  GAFTGA   G++G  R AD G+LFLDEI D+PL  QSRLL VLQ++ V P+G   A 
Sbjct: 397 YEDGAFTGARRAGFKGLFREADGGVLFLDEIGDMPLGLQSRLLRVLQEREVTPLGGGKAV 456

Query: 413 KVDIQIIAATHKNLEQLVTQGLFRQDLYYRLSDLVVELPSFQQRQDRQALIHHIHRRYSD 472
           KVD  ++ A+H++L+ LV QG FR DLY+R++   V LP  +   DR+AL+  + R  + 
Sbjct: 457 KVDFALVCASHRDLKMLVEQGSFRADLYFRIAQYTVTLPPLRSLADREALVERLWRDMAG 516

Query: 473 AGQQ--ICGDLMQRLLAYH-WPGNLRELDSLIKVASLMAEGEGVLTFNHLPTHL--AQKL 527
            G    +     +  LA H WPGN R+L  ++KV   +AE    +    LP  +  A   
Sbjct: 517 PGADAPLLSPACREALARHTWPGNFRQLTGVLKVLLALAEPGETVGPEALPADISAADLR 576

Query: 528 SHAAPTATE-----------DDQQKDIKSTVEASLLKTYQATQGNISQTSRLLGLSRNTI 576
           S A P A                  D+ S   A++    +   GNIS+ +R LG+ R+T+
Sbjct: 577 SPAQPAAASTLPASQAGDPAPGLSGDLGSVTRAAMDAALKECDGNISRAARRLGIHRSTL 636

Query: 577 YRKLKALG 584
           +R L + G
Sbjct: 637 HRHLASRG 644