Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., Nitrogen regulation protein NR(I), GlnG (=NtrC) from Sphingobium sp. HT1-2

 Score =  201 bits (511), Expect = 6e-56
 Identities = 120/326 (36%), Positives = 187/326 (57%), Gaps = 30/326 (9%)

Query: 288 VERCWQQANRVIDKDIRLLILGQTGVGKNEFVKALHKNSQRKNGPLVAVNCGALAKELVE 347
           ++  ++   RV+  D+ +L+LG++G GK    +A+H   QR+  P VA+N  A+ +EL+E
Sbjct: 148 MQEVYRTIARVLSNDLSILVLGESGTGKELVAEAIHSLGQRRTRPFVAINMAAIPRELIE 207

Query: 348 AELFGYVAGAFTGASHKGYQGKVRLADKGILFLDEIADLPLDAQSRLLHVLQDKTVLPVG 407
           AELFGY  GAFTGA  +   GK   A  G LFLDEI D+P++AQ+RLL VLQ   V  VG
Sbjct: 208 AELFGYEKGAFTGAQART-AGKFEQAQGGTLFLDEIGDMPMEAQTRLLRVLQSGEVTTVG 266

Query: 408 SNHATKVDIQIIAATHKNLEQLVTQGLFRQDLYYRLSDLVVELPSFQQRQDRQALI--HH 465
            +   +VD++IIAAT+K+L +L+ +  FRQDLYYRL+ + V LP  ++R++   L+  H 
Sbjct: 267 GSKPVRVDVRIIAATNKDLPRLIEENRFRQDLYYRLNVVPVSLPPLRERREDVILLARHF 326

Query: 466 IHRRYSDA--GQQICGDLMQRLLAYHWPGNLRELDSLIKVASLMAEGEGVLTFNHLPTHL 523
           + R   D    + +  D  Q L+AYHWPGN+REL ++++  ++++  E V+  + L   L
Sbjct: 327 LDRAAQDGLPRKALAEDAAQLLMAYHWPGNVRELQNIMQRLAVLSR-ENVIAADMLRHAL 385

Query: 524 ---AQKLSHAAPTA--------------------TEDDQQKDIKSTVEASLL-KTYQATQ 559
              A+   HAAP                             ++ + +E  LL +T  +  
Sbjct: 386 PLDAEPADHAAPAGQLAQAVREWTKRQLGVGLGQANPQLHDNLLAVIEPILLQETLASVD 445

Query: 560 GNISQTSRLLGLSRNTIYRKLKALGI 585
           GN  + + LLG++RNT+ +KL   G+
Sbjct: 446 GNQIRAAGLLGINRNTLRKKLTDYGL 471