Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., Acetoin catabolism regulatory protein from Pseudomonas putida KT2440

 Score =  294 bits (752), Expect = 8e-84
 Identities = 189/583 (32%), Positives = 306/583 (52%), Gaps = 24/583 (4%)

Query: 13  LVNSWQRSEQAGLTQQSRAQDIRLSDNKLKERRQELAGLIDTVSRFALPLFYQLFAHSDS 72
           +++SW+RS           Q  R+    L    +E A L   ++  A+   ++    +D 
Sbjct: 32  ILDSWRRSMDVYRLDPGSQQGPRILSQSLLNECRERAELFLRIASDAVARLHERVRGADY 91

Query: 73  RLILTDQHGVIIGSWGQARFREKLSQIALSSGACWQEPIKGTNAIGTALIEQKPISVIGE 132
            ++LTD  G  I    ++  R    +  L  G CW E  +GT  +   L  + P++V   
Sbjct: 92  CVLLTDAQGRTIDYRVESAIRNDCRKAGLYLGTCWSEGEEGTCGVAAVLTSKAPVTVHKR 151

Query: 133 QHFIQHHHFISCSASPIFDYTGQLIGVLDITSEQQKHTLSTQVVVQNMVQL----VENQL 188
            HF      ++C+A+P+FD  G+L+GV+D+++ Q      +Q +++ +V+     +EN  
Sbjct: 152 DHFRAAFIGLTCTAAPVFDPLGELLGVVDVSALQSPDDRRSQHLIRQLVEQTAREIENAF 211

Query: 189 LNQIPHGHVRIDLACEPSLLSSGWQGVIIADESGQILAHNQVAGQLLAQ--GRV---IGQ 243
                 GH  +     P  + S    ++  D  G++ A N +A Q L +  GR+   IG+
Sbjct: 212 FMHSAQGHWVMRAHGTPGYVESQPDYLLAWDADGRLQAINSLARQRLVERLGRLPEHIGE 271

Query: 244 --SVEQVLPRPQTHASFIYTTTPLHSKQHRTRALTPASDLHFG-DAEVERCWQQANRVID 300
              ++Q+     + A  +     L+ +    +    A  L    D  +E+  + A RV D
Sbjct: 272 LFDIDQLRRVSASSAQRLPGLGGLYGRVSAPQQRQRAQPLRQAQDTRIEQHLRLATRVKD 331

Query: 301 KDIRLLILGQTGVGKNEFVKALHKNSQRKNGPLVAVNCGALAKELVEAELFGYVAGAFTG 360
            ++ +L+LG+TG GK  F + LH+ SQR +GP V +NC A+ + L+E+ELFGYVAGAFTG
Sbjct: 332 CNLAVLVLGETGAGKEVFARQLHQQSQRCDGPFVTLNCAAIPESLIESELFGYVAGAFTG 391

Query: 361 ASHKGYQGKVRLADKGILFLDEIADLPLDAQSRLLHVLQDKTVLPVGSNHATKVDIQIIA 420
           AS KG QG ++ AD G LFLDEI D+PL+ Q+RLL VL +  V P+G+    +VDIQ+I 
Sbjct: 392 ASSKGMQGLLQQADGGTLFLDEIGDMPLNLQTRLLRVLAEGEVAPLGAARRERVDIQVIC 451

Query: 421 ATHKNLEQLVTQGLFRQDLYYRLSDLVVELPSFQQRQDRQALIHHIHRRYSDA-GQQI-- 477
           ATH++L  +V  G FR+DLY+RL++   ELP  ++R DR  LIH +    + A G ++  
Sbjct: 452 ATHRDLAAMVEDGRFREDLYFRLANARFELPPLRERDDRLGLIHQLLAEEAAACGVEVVL 511

Query: 478 CGDLMQRLLAYHWPGNLRELDSLIKVASLMAEGEGVLTFNHLPTHLAQKLSHAAPTATED 537
             D +Q LL Y WPGNLR+L  +++ A  ++EG G +    LP  +  +   +A      
Sbjct: 512 ADDALQALLVYRWPGNLRQLRQVLRYACAVSEG-GQVRLQDLPQEVRGEAVGSA------ 564

Query: 538 DQQKDIKSTVEASLLKTYQATQGNISQTSRLLGLSRNTIYRKL 580
             +  +       LL      +   +  +R LG+SR T+YR++
Sbjct: 565 --ESGVSCPARQLLLDALIRHRWKPADAARALGISRATLYRRV 605