Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., nitrogen regulation protein NR(I) from Magnetospirillum magneticum AMB-1

 Score =  194 bits (492), Expect = 9e-54
 Identities = 116/332 (34%), Positives = 187/332 (56%), Gaps = 38/332 (11%)

Query: 288 VERCWQQANRVIDKDIRLLILGQTGVGKNEFVKALHKNSQRKNGPLVAVNCGALAKELVE 347
           ++  ++   R++  D+ ++I G++G GK    +ALH   +R+NGP VA+N  A+ +EL+E
Sbjct: 150 MQEIYRTLARLMSTDLSVMITGESGTGKELVARALHDYGKRRNGPFVAINMAAIPRELIE 209

Query: 348 AELFGYVAGAFTGASHKGYQGKVRLADKGILFLDEIADLPLDAQSRLLHVLQDKTVLPVG 407
           +ELFG+  GAFTGA+ +   G+   A+ G LFLDEI D+P +AQ+RLL VLQ+     VG
Sbjct: 210 SELFGHEKGAFTGATQRA-AGRFEQAEGGTLFLDEIGDMPPEAQTRLLRVLQEGEYTTVG 268

Query: 408 SNHATKVDIQIIAATHKNLEQLVTQGLFRQDLYYRLSDLVVELPSFQQR-QDRQALIHHI 466
                + +++I+AATH++L QL+ QGLFR+DL+YRL+ + + LP  ++R +D   LI H 
Sbjct: 269 GRTPIRANVRIVAATHRDLTQLIRQGLFREDLFYRLNVVPIRLPPLRERSEDIPELIRHF 328

Query: 467 HRRYSDAG---QQICGDLMQRLLAYHWPGNLRELDSLI-KVASLMA-------------- 508
             +    G   + I G  M RL  + WPGN+REL++L+ ++A+L +              
Sbjct: 329 LAQAGAEGLPSKTIDGQAMDRLRKHRWPGNVRELENLVRRLAALYSQEVIGIEVIEQELV 388

Query: 509 -------------EGEGV--LTFNHLPTHLAQKLSHAAPTATEDDQQKDIKSTVEASLLK 553
                        EGEG+      HL  +         P    D   ++++  +    L 
Sbjct: 389 GGTPHADAISGGVEGEGLSATVERHLREYFGNHGDGLPPAGVYDRVLREVERPLVTIAL- 447

Query: 554 TYQATQGNISQTSRLLGLSRNTIYRKLKALGI 585
             +AT+GN  + + LLG++RNT+ +K+K L I
Sbjct: 448 --EATRGNQIKAAHLLGVNRNTLRKKIKDLDI 477