Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., Putative sensory histidine kinase YfhA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  193 bits (491), Expect = 1e-53
 Identities = 112/296 (37%), Positives = 175/296 (59%), Gaps = 13/296 (4%)

Query: 290 RCWQQANRVIDKDIRLLILGQTGVGKNEFVKALHKNSQRKNGPLVAVNCGALAKELVEAE 349
           R  +QA  V   D+ +LI GQ+G GK  F +A+H  S R N P VA+NCGAL ++L+E+E
Sbjct: 146 RLLEQARMVAQSDVSVLINGQSGTGKEIFAQAIHNASPRSNKPFVAINCGALPEQLLESE 205

Query: 350 LFGYVAGAFTGASHKGYQGKVRLADKGILFLDEIADLPLDAQSRLLHVLQDKTVLPVGSN 409
           LFG+  GAFTGA     +G  + A+ G LFLDEI D+P   Q +LL VLQ++ V P+GSN
Sbjct: 206 LFGHARGAFTGAV-SNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSN 264

Query: 410 HATKVDIQIIAATHKNLEQLVTQGLFRQDLYYRLSDLVVELPSFQQR-QDRQALIHHIHR 468
               +D++II+ATH++L + + +G FR+DLYYRL+ + +++P+  +R +D   L +H+ R
Sbjct: 265 RDIDIDVRIISATHRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLR 324

Query: 469 ----RYSDAGQQICGDLMQRLLAYHWPGNLRELDSLIKVASLMAEGEGVLTFNHLPTHLA 524
               R+    +    D M+RL+   WPGN+R+L ++I+    +A     +  + L     
Sbjct: 325 QSAQRHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVIE--QCVALTSSPVISDALVEQAL 382

Query: 525 QKLSHAAPTATEDDQQKDIKSTVEASLLKTYQATQGNISQTSRLLGLSRNTIYRKL 580
           +  + A PT  E   Q ++       L K  Q T+GN++  +R+ G +R   Y+ L
Sbjct: 383 EGENTALPTFAEARNQFELN-----YLRKLLQITKGNVTHAARMAGRNRTEFYKLL 433