Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., two-component system response regulator QseF/GlrR from Escherichia coli ECRC62

 Score =  190 bits (483), Expect = 9e-53
 Identities = 114/315 (36%), Positives = 183/315 (58%), Gaps = 19/315 (6%)

Query: 277 PASDLHFGDAEVERC------WQQANRVIDKDIRLLILGQTGVGKNEFVKALHKNSQRKN 330
           PA+D  + +A V R        +QA  V   D+ +LI GQ+G GK  F +A+H  S R +
Sbjct: 126 PATDERWREAIVTRSPLMLRLLEQARLVAQSDVSVLINGQSGTGKEIFAQAIHNASPRNS 185

Query: 331 GPLVAVNCGALAKELVEAELFGYVAGAFTGASHKGYQGKVRLADKGILFLDEIADLPLDA 390
            P +A+NCGAL ++L+E+ELFG+  GAFTGA     +G  + A+ G LFLDEI D+P   
Sbjct: 186 KPFIAINCGALPEQLLESELFGHARGAFTGAV-SNREGLFQAAEGGTLFLDEIGDMPAPL 244

Query: 391 QSRLLHVLQDKTVLPVGSNHATKVDIQIIAATHKNLEQLVTQGLFRQDLYYRLSDLVVEL 450
           Q +LL VLQ++ V P+GSN    +D++II+ATH++L + + +G FR+DLYYRL+ + +++
Sbjct: 245 QVKLLRVLQERKVRPLGSNRDIDIDVRIISATHRDLPKAMARGEFREDLYYRLNVVSLKI 304

Query: 451 PSFQQR-QDRQALIHHIHR----RYSDAGQQICGDLMQRLLAYHWPGNLRELDSLIKVAS 505
           P+  +R +D   L +H+ R    R+    +    D M+RL+   WPGN+R+L ++I+   
Sbjct: 305 PALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVIE--Q 362

Query: 506 LMAEGEGVLTFNHLPTHLAQKLSHAAPTATEDDQQKDIKSTVEASLLKTYQATQGNISQT 565
            +A     +  + L     +  + A PT  E   Q ++       L +  Q T+GN++  
Sbjct: 363 CVALTSSPVISDALVEQALEGENTALPTFVEARNQFELN-----YLRQLLQITKGNVTHA 417

Query: 566 SRLLGLSRNTIYRKL 580
           +R+ G +R   Y+ L
Sbjct: 418 ARMAGRNRTEFYKLL 432