Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., nitrogen regulation protein NR(I) from Dickeya dianthicola ME23

 Score =  188 bits (477), Expect = 5e-52
 Identities = 121/334 (36%), Positives = 183/334 (54%), Gaps = 26/334 (7%)

Query: 277 PASDLHFGDAEVERCWQQANRVIDKDIRLLILGQTGVGKNEFVKALHKNSQRKNGPLVAV 336
           P +D+      ++  ++   R+    I +LI G++G GK     ALH++S R   P +A+
Sbjct: 137 PTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPRTKAPFIAL 196

Query: 337 NCGALAKELVEAELFGYVAGAFTGASHKGYQGKVRLADKGILFLDEIADLPLDAQSRLLH 396
           N  A+ K+L+E+ELFG+  GAFTGA+    QG+   AD G LFLDEI D+PLD Q+RLL 
Sbjct: 197 NMAAIPKDLIESELFGHEKGAFTGANQIR-QGRFEQADGGTLFLDEIGDMPLDVQTRLLR 255

Query: 397 VLQDKTVLPVGSNHATKVDIQIIAATHKNLEQLVTQGLFRQDLYYRLSDLVVELPSFQQR 456
           VL D     VG   A KVD++IIAATH+NLE  V +G FR+DL++RL+ + V LP  ++R
Sbjct: 256 VLADGQFYRVGGYAAVKVDVRIIAATHQNLELRVQEGKFREDLFHRLNVIRVHLPPLRER 315

Query: 457 QD-----RQALIHHIHRRYSDAGQQICGDLMQRLLAYHWPGNLRELDSLIKVASLMAEGE 511
           ++      +  +    R      + +  +    L    WPGN+R+L++  +  ++MA G+
Sbjct: 316 REDIPRLARYFLQATARELGVEPKNLHPETEAALTRLPWPGNVRQLENTCRWLTVMAAGQ 375

Query: 512 GVL----------------TFNHLPTHLAQKLSHAAPTATEDDQQK---DIKSTVEASLL 552
            VL                T + +P   A  L+  A  A     Q    + +  +E +LL
Sbjct: 376 EVLIQDLPPELFETTAPDATVHVMPDSWATLLAQWADRALRSGHQNLLAEAQPEMERTLL 435

Query: 553 KT-YQATQGNISQTSRLLGLSRNTIYRKLKALGI 585
            T  + TQG+  + +RLLG  RNT+ RKLK LG+
Sbjct: 436 TTALRHTQGHKQEAARLLGWGRNTLTRKLKELGM 469