Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., Transcriptional regulatory protein ZraR from Alteromonas macleodii MIT1002

 Score =  193 bits (491), Expect = 1e-53
 Identities = 102/305 (33%), Positives = 182/305 (59%), Gaps = 22/305 (7%)

Query: 284 GDAE-VERCWQQANRVIDKDIRLLILGQTGVGKNEFVKALHKNSQRKNGPLVAVNCGALA 342
           G++E +++  ++A ++ + DI  L+LG++G GK  F +++H++S RK+ P VA+NC ++ 
Sbjct: 145 GNSEAIQKVVRRAEKIANTDISTLLLGESGTGKEVFARSIHEHSPRKDKPFVAINCASIP 204

Query: 343 KELVEAELFGYVAGAFTGASHKGYQGKVRLADKGILFLDEIADLPLDAQSRLLHVLQDKT 402
           + L+E+ELFGY  GAFTGA+ K   GK+  A  G LFLDEI D+P+  Q+++L  LQ++ 
Sbjct: 205 ENLLESELFGYEKGAFTGAN-KTTVGKIETAQGGTLFLDEIGDMPIGLQAKMLRFLQERV 263

Query: 403 VLPVGSNHATKVDIQIIAATHKNLEQLVTQGLFRQDLYYRLSDLVVELPSFQQRQD---- 458
           +  VG  +   VDI++I ATH++L+ +V Q  FR+DLYYR+ ++ + +P  ++R      
Sbjct: 264 IERVGGRNEIPVDIRVICATHRDLQAMVAQETFREDLYYRVGEMPIMIPPLRERDQDIIL 323

Query: 459 -RQALIHHIHRRYSDAGQQICGDLMQRLLAYHWPGNLRELDSLIKVASLMAEGEGVLTFN 517
             +  ++     +    +      +  +LA+ WPGN+RE+ + +K A +MAEG  +    
Sbjct: 324 LARTFLNIYREEFKAKAKSFSETAVNAMLAHKWPGNIREMQNKLKSAVIMAEGTVI---- 379

Query: 518 HLPTHLAQKLSHAAPTATEDDQQ----KDIKSTVEA-SLLKTYQATQGNISQTSRLLGLS 572
             P  L        P    D+ +    ++++   E+ ++ + YQ    N+S+T+ LLG++
Sbjct: 380 -QPDDLG-----LMPVDAHDEPETLNLREVREIAESRAIRRAYQKADKNMSKTAELLGVT 433

Query: 573 RNTIY 577
           R T+Y
Sbjct: 434 RPTLY 438