Pairwise Alignments

Query, 235 a.a., SDR family oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase from Xanthobacter sp. DMC5

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 53/196 (27%), Positives = 80/196 (40%), Gaps = 29/196 (14%)

Query: 4   VIIGGSGGIGLAMVQEALNRFSEANVHATYHS------TTPTWQH--PRLTWHALDATQE 55
           V+ GG  G+GLA  +    +     VHA          T PT     P  T+   D T E
Sbjct: 13  VVTGGGSGLGLACARRLAGQ--GFRVHALGKDLEIDLGTEPTAARNAPAFTFTDFDVTDE 70

Query: 56  AQVQALSEQFSQVDWLINCVGVL--HTASKGPEKNLNALDADFFLYNLIHNALPSLLLAK 113
           A V + +     VD LIN  G++    A   P      +D +        N    +  + 
Sbjct: 71  AAVTSFASSLDGVDVLINAAGIILHDMAEYAPAGFRRVIDVNL-------NGSQLMAWSL 123

Query: 114 HFTAKLKQSEAAKFATLSAKVGSICDNQLGGWYSYRASKAALNMLLKTLAIEWQRSLKKG 173
           H   K ++     FA++ +  GS      G   +Y ASK A+  L ++LA+ W      G
Sbjct: 124 HDHLKARRGCVVNFASMWSTFGS------GRNPAYSASKGAVLQLTRSLAVGWAAD---G 174

Query: 174 V-VLALHPGTTDTKLS 188
           + V A+ PG   T++S
Sbjct: 175 IRVNAVAPGWIKTRMS 190